| Id Trinity | TRINITY_DN49003_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_331563 |
| Sequence | GGATGTTAAGGCATACCCAACCACCACTTTCTGTGATTCTGAACCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT TCCCATCTACCCTTCTCTCTTTCTCTCCGTTTCACTCGACCCACTTGCACTCTCAATCTCTCACCCTCTCCCTCCGACCCACAACACCAACACCAACAAC TTCATCAGAATCCTCGCAATGTAATTCAAATCCTCGAAGAAAGGGGCCTCCTTGATTCCCTTACCAGCGATGCTCTCAGAAACATTTCATCAAACAGCAT TGGTGCAACTCCACCCCTCAAAGTCTACTGCGGTTTCGACCCAACCGCCGAGAGCTTACACCTTGGCAACCTCCTCGGCATTATTGTCCTCTCGTGGTTC CGCCGCTGCGGCCATAAACCTGTCGCCTTGATTGGTGGTGCCACTGCCCGGATTGGAGACCCATCAGGGAAGAGTGTTGAAAGACCTGAACTTGATGTTG ATACTTTGGAGAGAAATGCTGCAGGTATTTCTAGCATCATTGTTAGAATCTTGGGCCGTGCTCAAAATCAAAACTTGGGTGCTGATGATGATAATTCTGT TGTGGTATTGAATAACTATGATTGGTGGAAGGAGTTTAGTTTGTTGGATTTTTTGAAAAATGTGGGTAGGTATGCTCGTGTGGGTACAATGATGGCGAAG GAAAGTGTGAGAAAGAGGTTGGAATCGGAACAAGGGATGAGTTTCACTGAATTCACTTATCAGTTGTTGCAGGGTTATGATTTTTTGTACTTGTATCAGA ATGAGGGCGTGAGGGTTCAAATTGGGGGTAGTGATCAATGGGGTAATATAACTGCTGGAACTGATTTGATTAGGAAGATATTACAGGTGGATGGTGCTGC ATATGGCTTGACATTTCCACTTTTATTGAAGAGTGATGGCACTAAGTTTGGTAAATCGGAGGATGGTGCAATTTGGTTATCGCCAACCTTACTATCTCCA TACAAGTTTTACCAGTATTTTTTCTCTGTTCCGGATGATGATGTGATTAGGTTTTTGAAAATTCTTACTTTTTTGGATATTGAAGAGATAGCTCAGTTGG AGGGTGAGATGATTAAACCTGGGTATGTGCCTAATACTGCCCAGCGGAGGCTTGCCGAAGAAGTTACCCGATTCGTTCATGGGGAAGATGGTTTGAGTGA GGCTCTTAGGGCAACTGAAGCACTGAGGCCTGGATCTGAGACAAAGTTGGACTGGAAAACAATTGAGGGGATCGCTGAGGATGTCCCATCTTGTTCTTTG GCTTATGATGAGGTTTTGAATCAGTCATTGGTTGATCTTTCTGTTTCTTCTGGCTTGTTTGACAGCAAATCTGCTGCGCGCCGTTTGTTGAAGCAAGGAG GTGTTTACTTGAATAATTGCAGAGTAAATAGTGAAAATAAAAGGATTGAGGTAGAAGATATTGTGGATGGGAAAGTTCTCCTTTTATCTGCAGGCAAAAA GAATAAGGTGTTGGTGCGAATTGCATGACAGAATTTATCACATAGCTGAATATTAATATTATTTGTAAACTGCTTTATTTATTCTGTAAGTTTGTTGTAT GCTTAGTTTCCTTTGATTTTTTGGTGCTACATAAAAACTTCAAAGTTACTAATGAAATAAATATGGTTATTGGTTAACTAATTTGGCATTTGTTAGGTGT TCCAAGTCCAACTTCAATGATATTGATAATTTGATATCCTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165730; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331563
| Blastp | Tyrosine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 71.74% of identity |
|---|---|
| Blastx | Tyrosine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 74.54% of identity |
| Eggnog | Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (By similarity)(COG0162) |
| Kegg | Link to kegg annotations (AT3G02660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439601.1) |
| Pfam | tRNA synthetases class I (W and Y) (PF00579.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |