Ll_transcript_330549

• Id Trinity: TRINITY_DN49005_c4_g2_i1
• Name Transcript: Ll_transcript_330549
• Sequence: AAAGAACACAAACCCTACATACCCAAACCCAATCTGCACATCTATATATAGCTCAAACTTTCCCAACCCTCTCTTTATTTTTCTCCGCTGGATCTCACAT ATTACACACAAATATATTCTTTCTTTCTTATTTGCATGGCCTAATGTCTCGCACGTGCTCTCAGTGTGGCAACAATGGCCACAACTCTCGAACATGCACC GACACCGCCGCAGCGTCAGGCGGCGGAGACTCTCATAAAGAGAACAGCATCATGTTGTTCGGTGTTCGAGTCACTGAAGGGAAGTCCAATCTCTTCAGAA AGAGTGTTAGCATGACCAACCTCTCCCAATATGAACACCAAATCTCTCATGAACCCAACGCCGTTGATGCTGGCTACGTCTCAGACGACGTCGTTCACGC CTCCGGCCGCAGCCGCGAGCGTAAACGAGGTGTTCCATGGACGGAAGAAGAGCATAAGTTTTTCTTGTTGGGGTTGTCCAAGGTAGGCAAAGGAGATTGG AGAGGAATTTCTAGAAACTTCGTCAAAACTAGAACACCAACACAGGTGGCTAGTCATGCTCAGAAGTACTTCCTCCGCCTCCACAACCACAGCCGCCGCC GCCGCAGATCTAGCCTCTTTGACATCACCACCGACACGGTGATGAAACCATCAACTATATTGGAAGAAGAACAAGTTGTTCAGCAAGAAATGGTGGTGCC ACAGCCACCCACCTCCACCGTATACCCGCCATCACATTACGGTGCCTTCCCTGGCTCGGCTTTCCCCATGGTAGTAGCTCCGGTGGTGTTGCCCGTGACT GCTGGTGAGAGATCAGCTAAGCCTATTAGGCCAACACCGGTTTTGCCTGTTCCACCATCTTCCAAGTTGGCTAGTTTGAACTTGAAAGATAAAACTTCTC CCCCTCTTCCTCTCATTGAGCCTCTACCATTGTCACTGAAACTGCCGTCGCCACCACAATCCGAGGATCAGTTACCAACTCGTAGCCATTCGTCATCATC ATCGGCAATAGCTTTTCAGCCCCGGTCCACAGGGAAGTTCAATGGTGGTGGGGATAACATTATTAGAGTTGCTTGATTAGAGGAGAAAAAAAGGACATGT GTGATTAAAAAATGTAATCATGAGTAAAAAATGAAATTGATTTATCAGTAATCATTGTTATGAGATTAAATTTTGATTGTTCTGGATGTTTTTGGGTCAG AAATAACAATTATAATGAGATAATAACATAGGTGGAAGGTAGTGGTGTATGATTATGAGTTTATGATAATGATTAATTAGACAAAAATGGTTAAATTGTG TAGGTGATTAGGTGATTTTATTGTTAGTGGTAATGTACATGTTTAGAATAGTATGGAGGGAGAGGGAGAGGGAGAGAGATGGGTTCTCATATTCTATAGC AATTGGTCGATTCTTCTTTCTATTTATCTAGGGCAGTGTGATTGTTAAAATGATTGGGTACAAGGTCCTCTTGCTATGTTATTGGTCAGTTTATTGCCAC TTGGCCTGTCATTAAAAACTAGAGTGAGTATCAGCTGTCCCAAAACATGTCCCCAACCATGTACCAAGCCAATCAGAATGAAGAAAAAAAAATGTGAATG TTCAATTTTTTTAATTGATGTAACATATTGTTATTTGTTTAATACAGACTTTGTGTTTGGGACAGCTGGCCAAGACAAAGAGGAATATAGTATGCTCGTT ATTCTACTCTTCCAGGCGTGTCACTCGTTTTGTTTTTTCTCTTGTTTGGATCGATGATGCATTGGCCAATGACAACGAGTATACACTATTTTTCTGGTTA TATGGAGGGAGAAATACATCAAAAATAATGGAATAAAACAATATGATATAATATATTTATCTTTTAGAATATGATGATATGATATTTCTCTTCTTCAAAT AAGTGTAAAATCAATTACTCATCTCTCTGATAATGAAGAAAAG
• Tissue: pods
• Gene name: LI_gene_165748;
• Additional information: details;

Expression of Ll_transcript_330549

FPKM

• PAB: 18.6
• PNAB: 7.8
• PS1: 2
• PS2: 9.1
• PS3: 5.6
• PW1: 4.8
• PW2: 9.7
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330549

• Blastp: Transcription factor KUA1 from Arabidopsis with 53.16% of identity
• Blastx: Transcription factor MYB1R1 from Solanum with 65.41% of identity
• Eggnog: Transcription factor(ENOG4111IMA)
• Kegg: Link to kegg annotations (AT5G47390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422273.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;