Ll_transcript_330689

• Id Trinity: TRINITY_DN49007_c0_g1_i1
• Name Transcript: Ll_transcript_330689
• Sequence: CGAAAATAGAGAGGAGGAAGAAGAAAGAAGAAAGTGGGAGTGAAGACAAAAGAAGTACCGTTAGTGGTTAGAAGCTAAGTATTTGGCTCAATCAACGACT TCGTCATACCAATCTCTATTCAACTTTCATTTTTCAAACTTCAAAACACACACTTTCTCTCTCCATCGTGCTCACCTTTCACACAAACAAGCTAATTTCT TCTTTTCATTTTTCCTCTCTAATCGTTTCTGGAACATATACGCTTCTGGTTTGATGCCTTCGCTCATCTCACCTCAATGGCATGATAAAGCTACCGGTTT CTTTTCTTCCTCGGGGGTCAAGCTTAGAGAAGCTAAGGAATCAGCAGGAACATTCGTTGGCGAGGTCACAAAGGATACAAAGAGTAATGTTGTTGAAGTG GCAGGACGAGTTGGAAGTATGGTCAAAACTCGGTGGGCACTTCTTCAGCAGCCATCGACAAGACATGCTGTACAGGATCGGTTGATATCAGCTGCTGCTA CAACCGGTGTATTCCTAAGGAAAGGCTTATCAGGGACAAAAGATACGGTGGCTGTCGGTAAATCCAAGGTGGAAGAGGTGGCAAAAAAAACCGCACAAAA GAGTAAAACAATCTTGACAGACATTGAAAGATGGCAGAAGGGAGTCGCAAGCACTGATGTATTTGGAGTTCCTGTTGAGGTTACTGTGCAGAGGCAAGAT TGCAGCAAGCCTATTCCTCAGATATTGGTCAATTGTGCAGATTATCTTGTAGTTTCAGGATTGAACGCACTGTATCTCTTTAAATATGACGGGGATAAAA AGGTTATTCACCAGTTGATTTCCCTATACAACCAAGATTCAAATGCTTCAGTGCCAGAAGGCACAAATCCAGTTGATGTAGCAGCTCTTGCAAAGTGTTA TCTTGCTTGCCTTCCTGAGCCACTAACCACATTTGAACTTTATAATGAGATCAAAGGTGCTCGAACCAGTATATATTCCATGAGAAACATACTGAAGAGG CTTCCCAGTGTAAACTACATGACTCTGGAGTTTGTGACAGCTCTTTTGCTCCGTGTTAGCCAGAAATCACTTCTCAATAAGATGGATGCTCGGAACCTTG CAATGGAAATAGCACCTATTATTATGTGGCAAAAGGACCAGAGACCTGAATTCTATAGTCAATATTTGAATCATATGTCCAAAAGTCCTTCCAAAAGGAG CTTGGATCCACCACCTGGTTCAGACAGTAACTTTGACATGCTTGCTGATGATGGTGAAGCCATAGTTGCATCCTCTCCCATTCCTTTGGATGATGACACA CCCGTTGACTTTGGTGCAATTGAGGTTGTTCAGTTGCTGATAGAACATCATAATGCCATTTTTACTGATGCAAATGAGACAGTCTGGAGATGAATGGTTT TATCCTTCCTCCTCATCTTTAAACATGAAATGTTAGTCTCATGAGGATCATTATATAACAGCTATGTTTGAAGTTAAAAAAAATTATGCTGATAAAAGAA GTTGATACTGCTGTGCAGCGTTAGGGCATGTTCGCGAGTTGAGTTTTGGAAAGTAATGAATGGAAATGAAAGGGTTTCAGAGCCATCTCACATGTGTATT TCATGATTCTGAGCTCTTTCTCTTACTTCCCTTCTAAAACCCAACTCATAAACATAAACAGAACATTAGTGAATAAAGTATCTGATTTTTATACACTTTT GTATTGAGAGGTGTGATTGTTGATAATTGGAAAAAATAATATATCAAATTTGTATTGTACAGATATTGCTTGTTGAAACTCATCACAGATATGTGATCTT TGTTTATAACACAAATTAGACCCATTTTTGCACACAAATTTGAAGGTCAATTTAGTGCACCTATGCAAGGGGTTGCATAAAAGCTTGTGTTAATTCAAGA GCTACACAATTGTGCAGCCATGAAATCTTTTGAAAGTGGAGAACAATTGATGCTTAAGAC
• Tissue: pods
• Gene name: LI_gene_165771;
• Additional information: details;

Expression of Ll_transcript_330689

FPKM

• PAB: 13.3
• PNAB: 3.5
• PS1: 5
• PS2: 3.7
• PS3: 5.4
• PW1: 4.6
• PW2: 8.7
• PW3: 12.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330689

• Blastp: Uncharacterized Rho GTPase-activating protein At5g61530 from Arabidopsis with 68.87% of identity
• Blastx: Uncharacterized Rho GTPase-activating protein At5g61530 from Arabidopsis with 68.87% of identity
• Eggnog: rho GTPase activating protein(ENOG410XRR2)
• Kegg: Link to kegg annotations (AT5G61530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449561.1)
• Pfam: RhoGAP domain (PF00620.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;