| Id Trinity | TRINITY_DN49007_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_330698 |
| Sequence | ATCATTTGGTATGCAAAAGAAATTCTTATGGTTTTGATGATTTTGAATAAATTGATGATTTTCCTTTATCACAATCATCAATATCTGTTGTCATTTATAT GACAGTGGAAGTAATAACTAATCATGCTACTTTTAATGTTCTGCTTCTTAAGAACTTAGTAGTTTTTAGTAGATATGTCACAGGTAACAGTACAATATAT GGGTTCTGTTTCATTTTTGGTATCTTGTGCCAAACACTGCCTTAGGATTAGAATTTTGTCAATAACTGTTAGCTTGATAAACGATGAAGTACTAACTGAT TTTTTCCATTAACTGTGATTTTGGTATTAGCTTCTGGTTTGATGCCTTCGCTCATCTCACCTCAATGGCATGATAAAGCTACCGGTTTCTTTTCTTCCTC GGGGGTCAAGCTTAGAGAAGCTAAGGAATCAGCAGGAACATTCGTTGGCGAGGTCACAAAGGATACAAAGAGTAATGTTGTTGAAGTGGCAGGACGAGTT GGAAGTATGGTCAAAACTCGGTGGGCACTTCTTCAGCAGCCATCGACAAGACATGCTGTACAGGATCGGTTGATATCAGCTGCTGCTACAACCGGTGTAT TCCTAAGGAAAGGCTTATCAGGGACAAAAGATACGGTGGCTGTCGGTAAATCCAAGGTGGAAGAGGTGGCAAAAAAAACCGCACAAAAGAGTAAAACAAT CTTGACAGACATTGAAAGATGGCAGAAGGGAGTCGCAAGCACTGATGTATTTGGAGTTCCTGTTGAGGTTACTGTGCAGAGGCAAGATTGCAGCAAGCCT ATTCCTCAGATATTGGTCAATTGTGCAGATTATCTTGTAGTTTCAGGATTGAACGCACTGTATCTCTTTAAATATGACGGGGATAAAAAGGTTATTCACC AGTTGATTTCCCTATACAACCAAGATTCAAATGCTTCAGTGCCAGAAGGCACAAATCCAGTTGATGTAGCAGCTCTTGCAAAGTGTTATCTTGCTTGCCT TCCTGAGCCACTAACCACATTTGAACTTTATAATGAGATCAAAGGTGCTCGAACCAGTATATATTCCATGAGAAACATACTGAAGAGGCTTCCCAGTGTA AACTACATGACTCTGGAGTTTGTGACAGCTCTTTTGCTCCGTGTTAGCCAGAAATCACTTCTCAATAAGATGGATGCTCGGAACCTTGCAATGGAAATAG CACCTATTATTATGTGGCAAAAGGACCAGAGACCTGAATTCTATAGTCAATATTTGAATCATATGTCCAAAAGTCCTTCCAAAAGGAGCTTGGATCCACC ACCTGGTTCAGACAGTAACTTTGACATGCTTGCTGATGATGGTGAAGCCATAGTTGCATCCTCTCCCATTCCTTTGGATGATGACACACCCGTTGACTTT GGTGCAATTGAGGTTGTTCAGTTGCTGATAGAACATCATAATGCCATTTTTACTGATGCAAATGAGACAGTCTGGAGATGAATGGTTTTATCCTTCCTCC TCATCTTTAAACATGAAATGTTAGTCTCATGAGGATCATTATATAACAGCTATGTTTGAAGTTAAAAAAAATTATGCTGATAAAAGAAGTTGATACTGCT GTGCAGCGTTAGGGCATGTTCGCGAGTTGAGTTTTGGAAAGTAATGAATGGAAATGAAAGGGTTTCAGAGCCATCTCACATGTGTATTTCATGATTCTGA GCTCTTTCTCTTACTTCCCTTCTAAAACCCAACTCATAAACATAAACAGAACATTAGTGAATAAAGTATCTGATTTTTATACACTTTTGTATTGAGAGGT GTGATTGTTGATAATTGGAAAAAATAATATATCAAATTTGTATTGTACAGATATTGCTTGTTGAAACTCATCACAGATATGTGATCTTTGTTTATAACAC AAATTAGACCCATTTTTGCACACAAATTTGAAGGTCAATTTAGTGCACCTATGCAAGGGGTTGCATAAAAGCTTGTGTTAATTCAAGAGCTACACAATTG TGCAGCCATGAAATCTTTTGAAAGTGGAGAACAATTGATGCTTAAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_165771; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330698
| Blastp | Uncharacterized Rho GTPase-activating protein At5g61530 from Arabidopsis with 68.87% of identity |
|---|---|
| Blastx | Uncharacterized Rho GTPase-activating protein At5g61530 from Arabidopsis with 68.87% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XRR2) |
| Kegg | Link to kegg annotations (AT5G61530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449561.1) |
| Pfam | RhoGAP domain (PF00620.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |