Id Trinity | TRINITY_DN49010_c0_g1_i2 |
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Name Transcript | Ll_transcript_332150 |
Sequence | CACTTTTTACCTTGTTCTGAGTGGTTTGGCTTCTGGGTGTTGGAGTTTTAGACTCTGCAATGGTAATTCATGTTGAATTGTTGTGTTGGTTGTCTCATCT CTCTCATCCAAAAATATGTTTTTTGTTTCTTTTTCGTTTAGATTTTTAGCGGGGATGTGTTAGTACAATTTAACTTTTTGTGTAATTTGAAGCTGGGAAA GCTTGATTCTTAAGCTGAGTGTAACTTGTCTGGGTGTGGTTAGAAGTGATTACTGGTTTGTTTTATTTAATTTGTTGTGAATGTTTTTTGTTTGCATAAA CTAGGTAATATTTATGAAGTGATTGATGTGAGTCTTATTAACGCTGTTTTTCAGATCAGCTGTTTTAGAAAAGGAGAAAGAGTGGTCCTGAATGAATCAG ATTTCTCTTTGTCAAATATCATCCAAGTTGATATTCTTCAAAGATTTTGACTTTGAAATGGTGGGTTTTGTACTTTAGTGCATGATTGTGTAAGCAAGAA AATCAAAGGTTGACATCTGTGTCAAAGACATTGTTGATATCTCCTGATTCTTGAACCGGGACTATCAATTCAACCATATTTTTGTTTTGCTACATTGTAA CTTATATAAATTGGTATGGCTGTTACCAAGAGTAACAGCGGCAATGAACCGTCTACTTCATACAAGTGTTATAAAGTAGCAGACTTGGGGGGAACCATAT TAGACACAAGTCATACCTCTAATTTGAAGGATAGATACATTCTCGGGGAGCAGTTAGGTTTGGGACAGTTCGGTGTCATCCGAGCTTGCTACGACAAGCT GACAGGAGAGGTTTTGGCCTGTAAATCAATTGCAAAAGATAGGTTGGTTACTTCGAATGATCTGAGGAGTGTCAAACATGAGATTGAGATAATGGCTACA TTATCTGGGCACCCAAATGTTGTAGACCTCAAGGCAGTTTATGAAGAGGAAGATTATGTCCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAACTGTTTC ACCGACTAGAAAAGCATGGACGATTTTCTGAATCTGAAGCTAGGGTTCTCTTTAGGCACCTAATGCAGGTTGTTTTGTATTGCCATGAAAACGGGGTTGT TCATAGAGATTTGAAGCCGGAGAACATTCTCTTGGCAACGAGAGCCTCCTCATCTCCGATTAAATTGGCAGATTTTGGTCTTGCAACCTACATCAAGCCT GGTACGTGCTCTCTGTGCTTCCTTTGCAGATTATTAATCTGTGTGACTTTCGTTGATCCTATGAAAATCTGTGGTTCTAATCTTCAAATATCGGGATTTT ATGACCAGGACAAAGTTTGCACGGATTAGTTGGAAGTCCATTCTATATAGCTCCAGAGGTACTGGCAGGTGCATATAACCAGGCTGCTGATGTGTGGAGT GCTGGTGTTATTCTTTACATTCTATTGAGTGGGATGGCTCCATTTTGGGGTAAGACCAAGTCTGGGATATTTGAAGCTGTTAAGGCTGCTGACCTGAGGT TCCCACCAGATCCTTGGGATCACATTTCTGAATCAGCTAAGGATTTGATCAGGGGAATGCTCTGTACAGAAGCTTCTCGAAGGCTCACTGCCCAGGAGGT TTTAGATCATTGCTGGATGGAAACCAATCGAAAAAATATCGAAAAACTAAGTGAACATAGAATTCAAAGTTGTGAAGAATGTGATGTTGGTCGCAGCTCG TTCTCTGCCTCTTTTATGTCCAGAAACCAGGACATCAGCTTTGGCGTTGGATCACCTGCTTGTGATACTCAATCACCTACATTCACATGCAGATCGTCAT TTTTTTCTTTCGTGGAACCAGTGACTCCTTGTTTAGTTTCTGGAGGCTTTTCATTTCAAAGTGCAGGCGACTCCACCGGTTTGGAATTTTCTTCTCCTAT TCCCTCAATGCTTAGCTTTTCATTTCTCAGCCCGAGGCTTGTTGTTGAGCAAAAGAGTTGTAAATTAGATCGCTCAGCCATCATTTCAGATGTAAATGCC ATTGCTGGAGAAGCAAGCTTGGGAAAGTTGCTTTCACTACCAGATTCTAGCCTTTTCTCTGGAAAACATGTTAAAGAAACGGACCGCAAGCCTATAGAGA CTAAAAGAGCTGGTGTAGCAAACGGACATAATCGGGTATTGGGAATTCACAGCAAGAGAAACCGGACTATTGGACTTGGTGAGCACGAGCAACTTGATTT TGTGGTGACTGAATCAGTGATCCGTTGGTCATCATGCACGCAACTCCCTACATCTTTGAGATTGTCTCTTGTGTGTTAAACGGATAGAACTCCCAACTGA TAAATTAAACAGCTTCATGTTGTGCCTAAATTTTGGTGCAAGTTTTGCCTGCCTAACACATGTATATGTTTCCTTATTCAGACTGTCGTTACCGTTTTAT CCTTGGTACCGGTCATGTAGTTTAGATTTGGTGGTGGTTTAATTGTGTGTCTGATTGAGAAGTTCTAATTGCTCACTTTCTCTCTTTTTTTCCTTTACTG TTCTCATGTTAAGTACCTTGAGTGTGAGTAAAAGGCACTCTGACTAATTTGTAATGGAAGTTGTATCTTGTTATTACTCCAGCTATCTTCAAATGATGTT TATCCAACACTTTTTCAA BLAST |
Tissue | pods |
Gene name | LI_gene_165793; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_332150
Blastp | Calcium-dependent protein kinase 4 from Solanum with 58.73% of identity |
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Blastx | Calcium-dependent protein kinase 30 from Arabidopsis with 46% of identity |
Eggnog | calcium-dependent protein kinase(ENOG410XRMJ) |
Kegg | Link to kegg annotations (102604043) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431303.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |