Id Trinity | TRINITY_DN49018_c0_g2_i6 |
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Name Transcript | Ll_transcript_331459 |
Sequence | CGTTCATTCTATTGTTTGTGTCCGAAAAAGAACAACGAACGCACTCAAGACGACGTTTGCCATCGAGATCGCCACGGTGGCTCTCCGCCCTTCGCCGGAA TTGAGAATCCGCCACCTTCACTCGAAGTCCCTCCCATATAAACGACGCCGTTTCCGGATCTGACATCTCTCTCTATTCTAATCACAGGCTAAAGTGAAAC ATAGAGAAATGGATGATGATATCAACAATTGGTGGTATAATAAGGATCTCAGATATGATGAATGGGTACAAATCCCTGTGTCTGGTCCTCGTCCACTTCC TCGCTACAAGCATGCTGCAGCAGTAGTTGATGAAAAAATGTACATTGCTGGTGGGAGCCGTAATGGTCGGCAGTTATCTGATGTTCAAGTATTTGACCTT GGGAGTTTTACCTGGTCTTCTCTGAAACTAAAAGCAAATGCTGGGGAAGATGGTGACAGTAGCTCACAACAGATTCTTCCTGCCACATCCGGTCACAGTA TGATTAGGTGGGGGGAGAAACTACTTCTTCTTGGTGGCAGCTCAAAGGATTCTTCTGATCATCTAATGGTTCGATACATTGACATTGAAACATGCCAGTT TGGAGTTATTAAGACTTCTGGAAGTGTTCCAGTAGCTCGTACGGGACAGTCTGCGACACTGGTTGGTTCAAGAGTGATATTGTTTGGAGGAGAAGACATG AGCAGGAAGCTGTTGAATGATGTCCATGTTCTTGACCTGGAAAGTATGACTTGGGATTTGATAAAGACTACGCAGACACCTCCAACTCCTAGATACGATC ATGCAACTGCTATACACGGAGAGCGGTACCTTCTGATTTTCGGTGGTTGCTCTCATTCTGTCTTCTTCAATGATCTTCACTTATTAGACGTGCAAACAAT GGAGTGGTCTCAACCACAAATTCAAGGAGACTTAGTATCTCCTAGGGCTGGACATGCTGGTATCACTGTTGATGGAAGCTGGTTCATTGTTGGTGGTGGA GATAACAAAAGCGGTTGCCCCGAAACCTTGGTGTTGAACATGTCTAAGCTTGTTTGGTCAGTGTTAACTGTAGTAAAGCAAAAAGATCCACTTTCTAGTG AGGGTCTTAGTGTTTGCTCAGCATTGATTGATGGAGAAAAGTATTTATTAGCTTTTGGTGGCTATAATGGTAGGTATAGCAATGAGGTTTTTGTTTTGAG GCCCAAGGCAAGGGACTTCTTGCGTCCCAAGATTTTCCAATCGCCAGCCGCTGCCGCTGCAGCAGCTTCTGTGAGTTCTGCTTATGCATTATCTAAATCT GAGAAGTTGGATTTCATGCAACTAGATGATATAAATTCCAAGCCATCTGTAAATGGCCATCCTCTAGATGATGTCACAGTTAAAAGTGAGGCCATTAAAG AAGAAAAACGGTTATTAGAATTGTCAATTGCAGAAGTCAGGGCTGAAAATTCAAGGCTCAGAGACGAAATAAACGAAGTAAATAGTACTCATACTGAGTT GACCAAGGAACTTCAGTCAGTCCAAGGACAACTCTTGGGTGAAAGATCAAGATGTGTTAACCTGGAGGCTAAGATTGCAGAACTCCAAAACATGCTGGAA TCAATGCAGTCTGTGGAAGATCAAGCACGGGCTCTTCGTAATCAAAAGTCTGCCCTGGACCAGGAAACGGAGCATGCTGCAACTGTTCAGCGGCAGAGTT CTGGTGGTGTTTGGCGATGGCTTGGTGGGGGTGGTGAGAGCGATGCCAACTAAAATTGATTTCGGAGTGGAGTCCTGGGACTTCAACTTTCTTATAAGCA ACAGATTGTATTGATTTATTTTGGTTCAATTGATTGTATTATTAACTTTTGCGTTGAAATTGAAATGCATGACCAATAAGATGTTAAACTCCAATTTTGA AGGGTTGATCTAAAATTTTCAGAGATGGGTATTGTATATAAGCTTTTTATATTTAGTACTTGAACAAGTTTATTTTTCTGTGATTCATTTCATGGCCATG TGTCCTTAAATTGTACAGGACATACTTTTATTATCCCATTTATTTAAGTATATATTGAGTATAAA BLAST |
Tissue | pods |
Gene name | LI_gene_165841; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331459
Blastp | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 45.69% of identity |
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Blastx | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 45.1% of identity |
Eggnog | Kelch domain containing(ENOG410Y5WM) |
Kegg | Link to kegg annotations (AT3G05420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441010.1) |
Pfam | Kelch motif (PF13854.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |