Ll_transcript_332224

• Id Trinity: TRINITY_DN49020_c0_g1_i13
• Name Transcript: Ll_transcript_332224
• Sequence: TTTTTTTCTCTCTTAATTCCCGTTTTACCCTCTACCTCTTTCGTATTCTTTCTTTTGAAAACGGACATTTCCTCTCTGATTCTCTCTGTTTATTTTTTCA TATCTATGTATATATATTAACCTGGTCTATTTTCATTTTCGCTTATAAGTGATTATTTTCGTTTTCGCTTTCGCTTTTCATTATTCATCGCAAACAAAAC ACAGCAACACTCTCCAATATTCCAAACACATGTCATCGCTTCGTTCTAACACCATATTCTTCTTGTGATCATCACCACCCATGGTTTTAATGGGTTGAAC TTCAAGAATCATGGGTAGCTTCAGCGGAGATGAGGAATGTGAGTTTTTCGACGCCGTTGAGGATATTGTGTCTATTGCTGATGAAAAATTGGATGGCAAA AACAGTGATTCTAATGCTAAAGAAGGAATGTCCAATGGTTTTGATTATGATTTGTGGATTAGGAAACCGAGAAGTGTGAGAGAGCGAAGGAGTATGTTTA TGCAGAGGATGGGGTTGAGGGTGACTGAGAATGGAGTTACAAATTCAGTGGATATGGGTGGTGGTGGTGGTGTTGAAGGGGAAAAGATGAATAATAGTGT GAATGATAGTGATGGGGTTGTGGATAGAAATTGTGGTTTTGAGGAGGAGTTCTGTTCGAGCCGGTCATCGGTGTCTTGTTGGCCTACTTTGAATTCTTCG CAGGAGTTTGGTGTGATGGAGAATTTGCCTTGTCACCTGGATCAGGAGGGTCAGGATAGAAAGATGAGTGATGGTGGTAGAGATAGGGATTCGGATAGGT CGGTGGTTGCTGAGGAACTTGAGGATTCTAAGAACACCTTTCAACGTCTGACGAGTAGGGAGTTTGAGGAGATCGATGCGGATGCTTTATCCAAGAAGTC CAACAGGCCTGTAAGGGCTTGGTTAAGAAGATTGCAGTCGATAACATGTATGAGGGATAAGCAAAGTGAAAGTGAAAAGGAACAAGGAGATAGTTGTGCA TTCTCAGGGTGTAGGCTTCAGAAAGTTAAGGTTCGCCAATGCAAGAAACAAATGAAGGAACTTTCAGCTCTTTACATGAGGCAAGACATCCAAGCACATG AAGGTTCGATTTTGACCATGAAATTCAGCTCCGATGGGCAGTATCTTGCCAGTGCTGGTGAAGATGGTGTTGTGCGCGTGTGGCAAGTGGTTGTGGACGA TAGGTGTAATGAAATTGACATTCCTGAAATTGATCCATCCTGCATTTACTTCACAGTGAATGATCTCTCTGAATTGAGACCACTGTTTATGGACAAGGAA AAACTTACCAAAGTGAAGGGCCTGAAAAAAACATCAGATTCAGCATGCATTATTTTCCCGCCTAAGATCTTTCGGTTGTTGGAGAAACCATTGCATGAGT TCCACGGTCATACAGGTGAAGTTTTGGATATCTCTTGGTCAAAGAATAATGTGAGTGAATGCCATAATTTTAGTTATTTATTGAACTTTGAACTAGATAT ACACTTTGGTATATAGACTAAATTTTGGGGACATTGACTTGGTTTTCATTTTCTTTTTGGATGCAGTATCTTCTGTCATCTTCAGAAGACAAAACTGTCC GTCTATGGCACGTGAAAAATGAAAAATGCCTGAAAATTTTCTCACACAGTAATTATGTGACATGCATACAATTCAATCCCATGGATGACAATTATTTCAT TAGTGGATGTATAGATGGAAAAGTACGCATCTGGGCAGTTCCTGATTGTCATGTTGTTGACTGGATTGATACTAGAGAGATAGTGACTGCAGTATGTTAT CGGCCTGATGGGCAGGCAGGGATTATCGGCTCCATGGCAGGCAATTGTCGATATTTTAATGCATCAGAGAATCAATTGCAGTTAGATTCCCAACCATGCT TACTTGGTAAAAAGAAACTTCCTGGCAGAGGGATAACTAGCTTTCAGTTTCTTTTACAAGATTCTAACAAAGTTATGGTTACTTGTGCTCATTCACAAGT CAGAATCCTTCATGGGCATAATGTGATTAGCAAATACAAAAGCCTAAGTGGTGGGAGTGCAATGTCTGCATCATTTACTTCTGATGGGAAACATATATTA TCTGCTTGTGAGGACTCTAATGTTTACCTATGGAACCTTAGTCAGGATGAGCCTAGTCCCACAAAAGTTAAGAAGATTACATCTTGTGAGCGGTTTTTCT CAAATGCATCTGTCGCAATACCTTGGCATGGTTTGAAATCTCAAAATACTGAAAATGGACTTCAATTGGATGTCTTGGATAGAAGATCGCCTCTAGGTAT ACGACTCAGTCCACCTGCTTCTTTCTCTCTGGACCAAGATTTTTTCTTGGAGTCTTTTCCCAAGGGATCTGCGACTTGGCCTGCAGATAAACTTCCTGTT TCAAGCTCCAAGGCTAAAACATCTGTGATGCATAAATCTGAATATAAGTTCTTGAAATCTTCTTGTAAGGGTACCTCCCATTCTCATGCGTGGGGCATGG TGATTGTGACTGCAGGATTGGATGGACGAATAAAATCATTCCACAATCATGGGTTACCTGTACCTGTTTGAAAAGATGTGGCTTTGCTTGGTTGGAGAAT CTAATCAAGATTCATTGCTGTTCTTGGAAAACCGCATGCTGCTAATGTTGTGAGGTTCAACAGCGATGTCGACTTTGCCAGCACCAGTAACAATGCAGGT TGCGTTCAATCCTCAAGCAGGAAATACAATTGTGATGAGTGAGGAACTTTGGCTTTCAGGTGGTCCCCCTTTAAGATTTCAGGGGATTAATTTTACCTAT TGGTTCATGACAAGTGGTGGTGTTACTGTGGTTCTAATGTAATCCTAATTGAAATGCGTTAGTGGCCAGGGTTTAGGTTGTCCCTGTATGCAGTCTAAAT TGCCTTATGCTATAACAAGAATCTAATGGCCCCTAAACCATGTGATATTAACTTGGTAGACGGCCTACTAGATATTATTTTGATATGTTGTCGCCTTGTG GGACCATAGTAGACCTTCATGTTTCCTTAAGATGAAATGGTGAAATTCTAGAGCCGGTGGCTGAAGTTTGCTTTGATCAAAATGCTGAGAGCGGTGTTGA CGATCATTTTTGGCAGCGCTAAACTAATTGAATCTCTTTTTCTGCCAATCTTCCACTCCACCATATGGTAGGGCCTGATATGCTGGAACTTAATGGGGTG CAGAGCTTCATGAATAGGTGCTTTTATATCTACTTCATGAATAGGTTGCTTTTATATCTGCTTCATGTATAGGTGCTTTTATTATCTACCTGTTACTCCA ATGATATAAACAGTAGTACATGCTACCAATCAGATTTTCTTCTCTTATGTCATTATTGGCTTGGAAGTTTTGCTGATTGTCAGAGCCTCTTGCAACTCCT GCAGTGCTGACAAATATCATTGTTAAAAATATTCTGTATATGGTCTCAAATTTTAGGTTGACATTACTTTTTGATTAGTTGAGTTACTAAGCTCTTATCC TTTGTAATATAATTATTATTAGTTTCATTTTGGTTTTGCTAAATACTAGATATGTAAATATGTAATTTGCTCTATGTAAGTAAAATTGTGTTGCCATGGT CCCTGGTTTATGGAAACTAAAA
• Tissue: pods
• Gene name: LI_gene_165848;
• Additional information: details;

Expression of Ll_transcript_332224

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0
• PS2: 0.4
• PS3: 0.2
• PW1: 0
• PW2: 0.2
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332224

• Blastp: WD repeat-containing protein YMR102C from Saccharomyces with 25.88% of identity
• Blastx: WD repeat-containing protein 44 from Homo with 35.59% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YMR102C)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415404.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;