Ll_transcript_332218

• Id Trinity: TRINITY_DN49020_c0_g1_i7
• Name Transcript: Ll_transcript_332218
• Sequence: GATCACCAAACTAGAAAAATATTAATCACCAAACTTTTTATTTAAATATATATTTTTCTACAATCATGGCACTTTTTGCGAGGTGCTACCCTTCTTCCTT CATACCAATCGCTCTCTCTATATATTAACTTGGCCTATTACATGTTTCGCTCATAAGTCGTAAGTGATTATGCATTTTTACCTGATTTTGCTTATAAGTG ATTATTCTTCACAAGCCACAACACTACACTATTTCAAACCCATACCACCGCTTCGATCTAGCACCATAATCTTCTTCTGACCATCACCACCCATTTTAGG ATAAAAAAAATTGGATTTTCACACATACCCAGTTCTTAAAATGTTGTTTATTTGAGAGGGGGTTTCATGGGTTGAACTTCAAGAATCATGGGTAGCTTCA GTGGAGACGAGGAATGTCGTTTTTTCGATGCTGTTGAGGATGTTGTATCAATTGCAGATACAAAATTGGACAATGGCAGTGTTTCTACTCCTAGAGAAGG AAAATCCAATGGTTTTGATTATGAAGTTTGGATTCAGAGCCCAAGGAGTGTGAAAGAACGTAGGAGTAGGTTTATAAAGAGGATGGGGTTGAGTGTGGAG GGGAATGGAGTTAGAGGTTCAGTGGATTTGTGTGGTGGTGGTGTTGATGGGGAAGAGGTGAATGATAGAGTGAGCTATAGTAAGGGTGCTGTGGATAGGA GTTGTGATTTTGAGGAGGAGTTCTGTTCGAGCCGGTCATCAATGTGTTTTTGGTCTCCAACAAATTCTTCACAGGAGTTTGGTTTGGTGGAGAATTTTCC ATGTAATGTGGATCAGGAGGGGGAGGAAATGAGGATGAGTGATTGTAGTAGATATGTGGATTCGGATCGGTTGGTGGTTGCTGAAGAGCCCGAGGTTTCT GAGAACACCTTACAACATCTGTCGAGTAGGGGGTTTGAGGAAACGAATGCTGATGTGGATGCTATATCGAAGAGGATGAACAGGTCTAGAAGGAGTTGGT TACGGAGATTGCGGTCTATTATGTGTGTAACGGATACACAAGGTGAATCTAAAAATCGAGGACAAGGAGATAGTTATAGATTCTCAGGGAAGCTTCAGAA AATTAAGGTTCGTCAATGTAAGAAGCAAATGAAGGAACTTTCAGCTCTTTACATGAAGCAAGACATTCAAGCCCATGAAGGTTCAATTTTGACCATGAAA TTCAGCCCTGATGGACAGTATCTTGCTAGTGCTGGTGAAGATGGGGTTGTCCGCGTGTGGCAAGTGGTTGTTGAGGATCGGTGTAATGAAATTGACATTC CAGAAATTGATCCATCCTGCATTTACTTCACAGTGAATAATCTCTCTGAATTGACACCACTGTTTATGGAAAAGGAAAAAAATAGCAAAGTGGAGGGCCT GAAAAAAACATCAGATTCAGCTTGCATTATTTTCCCTCCTAAGATCTTCCGGTTGTTGGAGAAACCGTTGCAAGAGTTCCACGGTCATAAAGGTGAAGTT TTGGATCTCTCTTGGTCAAAGAATAATTATCTCCTGTCATCTTCGGTTGACAAAACTGTCCGTCTATGGCATGTGGAACATGAAAATTGCCTGAAAATTT TCTCTCACGCCAATTATGTGACATGTATACAATTCAACCCGGTGGATGACAATTCTTTCATTAGCGGATGTATAGATGGAAAAGTGCGCATCTGGGCAAT TCCTGAGTGTCATGTTGTTGATTGGATTGATATTAGAGACATAGTGACTGCAGTGTGTTATCGGCCTGATGGGCAGGGAGGAATTATTGGCTCCATGGCA GGCAATTGTCGATATTTTAACATAGCAGATAATCACTTGAAGTTAGATTCCAAACTATGCTTGCTTGGTAAAAAGAAACTTCCTTGCAGAGGGATAACTA GCTTTCAGTTTCTTCCACAAGATTCTAATAAAGTTATGGTTAGTTCTGCTGGTTCACAAATCCGAATCCTTGATGGACCTAATGTGATTGGCAAATACAA AAGCCTTAGTGCTGCGAGTGCAATGTCGGCATCTTTTACTTCCGATGGGAAACATATATTATCAGCCTGTGAGGACTCTAATGTATATCTATGGAATGTT AGTCAGGATGAGTCCAGTCCCACAAAAGCTAAGAAGATTACATCTTTTGAACGGTTTTTCTCAAATGCATCTGTTGCAGTGCCTTGGCATGGTTTGAAAT CTCAAGATATTGGAAGTGGACATGAATTAGATGCCTTAGATAAAAGATCAATTCCTCAAGGTATACAACTCAATCCACCTGCTTCTTTCTCTCTGGACCA AAAGTTTTTCTTGGAGTCTTTGCCCAAGGGATCTGCAACTTGGCCTGAAGAGAAGCTTCCCTTTTCAAGCCCCAAGGCTAAATCATGTGTGATGCATAAA TCTGAGTACAAGTTCTTGAAGTCTTCCTGCAAGAGTACTTCCTGTTCACATGCGTGGGGTATGGTGATTGTGACTGCAGGGTGGGATGGACGTATAAAAT CATTCCACAACTACGGATTACCTATACCCGTTTGAGAAGATGTGGCTTTCCTTGGTTGGAGAATAGATTCAAGATTCCTTGCTTTTCTTGGGAACATTGT TGTTGGAAAATCACATGCTGCTAATGTTCTTCGAGGATTGAGAGTGATGTTGACTTCGGCAGCATCAGTAACAAAGCAGCTTTGAGGTCAAACCTTAAGC AGAATTACGACTGAGACGAGTGAGGAACTTTGGCTTTCAGGTGGTCCCCCTTTAGATTTCAGGGGATTAATGTTCCTAATGGTCCATGACAGGTGGTGGC ATTACTGTGGTTCTAATGTAATCCTAATGGAAATGAGGTAGTGGCCAAGTTTTAGCTTGTCTGGGAACCCAGTCTAAATTGCCTTTTGCTACAACAAGAA TCTGCTGGCCCCTAAAAGAGATGCAAAGTCATGTGATATCAACTTGGTATAGGGCCTATGAGATATTATTTTGATATGCTGTGGGACCTTAGCAAACCTT CATGTTTGGAAGCCGGTGGCTGAAGTTTGCTGTGATCAAAATTCTGAGGATGGTGTTGATTTGATGATCATTATTGGCAGAGCTAACTAATTCAAACTTT GTCTGCCAATATTTCTCTCCATCTCAAGGTGGGGCATTGTATGCTGGAACTTGTGAATGTGGTGAAGAGCTTCATCAATATGTGTTTTTCTATCTGCCTT TTTTCTCCAATGATATTTGCAGTACATGCAACCAAACAGATTTTCTTTTGTCCAGTCATTAGTGGCTTGAAACTTTTGCCGACTCTCGCAGCTGATGCAG TGCCTTCAAATATCATTGCTAACAAATATTCTGTATATGGTCTCAATTTCAGGCGGACATCACTTTTTGATCAGTTGAGTTCCTAGGATATCATCCTTTG TAATTTTATAGTATTTTCATTTTGGTGCTGCTAGATATAAGATATGTAAATTTGTAATTTGCTTTATGTAACTAAAATTTTGTTACCATGATCTCTGATT TATAGAAAGTGAAACTCTTTGTATGATCATTGATCACTCCTTTTTTCTTGGTCATGAAGTAATCAACAAAGAACTTTGTTCTCTCTGTATATATATGAAG ACCATGTGCAAGGTTTAATATGTGACACACTTTTGTAAAGAAGCTAAAAGGGACA
• Tissue: pods
• Gene name: LI_gene_165848;
• Additional information: details;

Expression of Ll_transcript_332218

FPKM

• PAB: 0.5
• PNAB: 5.2
• PS1: 2
• PS2: 1
• PS3: 0.9
• PW1: 5.4
• PW2: 2.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332218

• Blastp: WD repeat-containing protein 44 from Bos with 34.35% of identity
• Blastx: WD repeat-containing protein 44 from Bos with 31.4% of identity
• Eggnog: WD repeatcontaining protein(ENOG410XQPJ)
• Kegg: Link to kegg annotations (286825)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417475.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;