| Id Trinity | TRINITY_DN49020_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_332220 |
| Sequence | GATCACCAAACTAGAAAAATATTAATCACCAAACTTTTTATTTAAATATATATTTTTCTACAATCATGGCACTTTTTGCGAGGTGCTACCCTTCTTCCTT CATACCAATCGCTCTCTCTATATATTAACTTGGCCTATTACATGTTTCGCTCATAAGTCTTTAGGATAAAAAAAATTGGATTTTCACACATACCCAGTTC TTAAAATGTTGTTTATTTGAGAGGGGGTTTCATGGGTTGAACTTCAAGAATCATGGGTAGCTTCAGTGGAGACGAGGAATGTCGTTTTTTCGATGCTGTT GAGGATGTTGTATCAATTGCAGATACAAAATTGGACAATGGCAGTGTTTCTACTCCTAGAGAAGGAAAATCCAATGGTTTTGATTATGAAGTTTGGATTC AGAGCCCAAGGAGTGTGAAAGAACGTAGGAGTAGGTTTATAAAGAGGATGGGGTTGAGTGTGGAGGGGAATGGAGTTAGAGGTTCAGTGGATTTGTGTGG TGGTGGTGTTGATGGGGAAGAGGTGAATGATAGAGTGAGCTATAGTAAGGGTGCTGTGGATAGGAGTTGTGATTTTGAGGAGGAGTTCTGTTCGAGCCGG TCATCAATGTGTTTTTGGTCTCCAACAAATTCTTCACAGGAGTTTGGTTTGGTGGAGAATTTTCCATGTAATGTGGATCAGGAGGGGGAGGAAATGAGGA TGAGTGATTGTAGTAGATATGTGGATTCGGATCGGTTGGTGGTTGCTGAAGAGCCCGAGGTTTCTGAGAACACCTTACAACATCTGTCGAGTAGGGGGTT TGAGGAAACGAATGCTGATGTGGATGCTATATCGAAGAGGATGAACAGGTCTAGAAGGAGTTGGTTACGGAGATTGCGGTCTATTATGTGTGTAACGGAT ACACAAGGTGAATCTAAAAATCGAGGACAAGGAGATAGTTATAGATTCTCAGGGAAGCTTCAGAAAATTAAGGTTCGTCAATGTAAGAAGCAAATGAAGG AACTTTCAGCTCTTTACATGAAGCAAGACATTCAAGCCCATGAAGGTTCAATTTTGACCATGAAATTCAGCCCTGATGGACAGTATCTTGCTAGTGCTGG TGAAGATGGGGTTGTCCGCGTGTGGCAAGTGGTTGTTGAGGATCGGTGTAATGAAATTGACATTCCAGAAATTGATCCATCCTGCATTTACTTCACAGTG AATAATCTCTCTGAATTGACACCACTGTTTATGGAAAAGGAAAAAAATAGCAAAGTGGAGGGCCTGAAAAAAACATCAGATTCAGCTTGCATTATTTTCC CTCCTAAGATCTTCCGGTTGTTGGAGAAACCGTTGCAAGAGTTCCACGGTCATAAAGGTGAAGTTTTGGATCTCTCTTGGTCAAAGAATAATTATCTCCT GTCATCTTCGGTTGACAAAACTGTCCGTCTATGGCATGTGGAACATGAAAATTGCCTGAAAATTTTCTCTCACGCCAATTATGTGACATGTATACAATTC AACCCGGTGGATGACAATTCTTTCATTAGCGGATGTATAGATGGAAAAGTGCGCATCTGGGCAATTCCTGAGTGTCATGTTGTTGATTGGATTGATATTA GAGACATAGTGACTGCAGTGTGTTATCGGCCTGATGGGCAGGGAGGAATTATTGGCTCCATGGCAGGCAATTGTCGATATTTTAACATAGCAGATAATCA CTTGAAGTTAGATTCCAAACTATGCTTGCTTGGTAAAAAGAAACTTCCTTGCAGAGGGATAACTAGCTTTCAGTTTCTTCCACAAGATTCTAATAAAGTT ATGGTTAGTTCTGCTGGTTCACAAATCCGAATCCTTGATGGACCTAATGTGATTGGCAAATACAAAAGCCTTAGTGCTGCGAGTGCAATGTCGGCATCTT TTACTTCCGATGGGAAACATATATTATCAGCCTGTGAGGACTCTAATGTATATCTATGGAATGTTAGTCAGGATGAGTCCAGTCCCACAAAAGCTAAGAA GATTACATCTTTTGAACGGTTTTTCTCAAATGCATCTGTTGCAGTGCCTTGGCATGGTTTGAAATCTCAAGATATTGGAAGTGGACATGAATTAGATGCC TTAGATAAAAGATCAATTCCTCAAGGTATACAACTCAATCCACCTGCTTCTTTCTCTCTGGACCAAAAGTTTTTCTTGGAGTCTTTGCCCAAGGGATCTG CAACTTGGCCTGAAGAGAAGCTTCCCTTTTCAAGCCCCAAGGCTAAATCATGTGTGATGCATAAATCTGAGTACAAGTTCTTGAAGTCTTCCTGCAAGAG TACTTCCTGTTCACATGCGTGGGGTATGGTGATTGTGACTGCAGGGTGGGATGGACGTATAAAATCATTCCACAACTACGGATTACCTATACCCGTTTGA GAAGATGTGGCTTTCCTTGGTTGGAGAATAGATTCAAGATTCCTTGCTTTTCTTGGGAACATTGTTGTTGGAAAATCACATGCTGCTAATGTTCTTCGAG GATTGAGAGTGATGTTGACTTCGGCAGCATCAGTAACAAAGCAGCTTTGAGGTCAAACCTTAAGCAGAATTACGACTGAGACGAGTGAGGAACTTTGGCT TTCAGGTGGTCCCCCTTTAGATTTCAGGGGATTAATGTTCCTAATGGTCCATGACAGGTGGTGGCATTACTGTGGTTCTAATGTAATCCTAATGGAAATG AGGTAGTGGCCAAGTTTTAGCTTGTCTGGGAACCCAGTCTAAATTGCCTTTTGCTACAACAAGAATCTGCTGGCCCCTAAAAGAGATGCAAAGTCATGTG ATATCAACTTGGTATAGGGCCTATGAGATATTATTTTGATATGCTGTGGGACCTTAGCAAACCTTCATGTTTGGAAGCCGGTGGCTGAAGTTTGCTGTGA TCAAAATTCTGAGGATGGTGTTGATTTGATGATCATTATTGGCAGAGCTAACTAATTCAAACTTTGTCTGCCAATATTTCTCTCCATCTCAAGGTGGGGC ATTGTATGCTGGAACTTGTGAATGTGGTGAAGAGCTTCATCAATATGTGTTTTTCTATCTGCCTTTTTTCTCCAATGATATTTGCAGTACATGCAACCAA ACAGATTTTCTTTTGTCCAGTCATTAGTGGCTTGAAACTTTTGCCGACTCTCGCAGCTGATGCAGTGCCTTCAAATATCATTGCTAACAAATATTCTGTA TATGGTCTCAATTTCAGGCGGACATCACTTTTTGATCAGTTGAGTTCCTAGGATATCATCCTTTGTAATTTTATAGTATTTTCATTTTGGTGCTGCTAGA TATAAGATATGTAAATTTGTAATTTGCTTTATGTAACTAAAATTTTGTTACCATGATCTCTGATTTATAGAAAGTGAAACTCTTTGTATGATCATTGATC ACTCCTTTTTTCTTGGTCATGAAGTAATCAACAAAGAACTTTGTTCTCTCTGTATATATATGAAGACCATGTGCAAGGTTTAATATGTGACACACTTTTG TAAAGAAGCTAAAAGGGACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165848; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_332220
| Blastp | WD repeat-containing protein 44 from Bos with 34.35% of identity |
|---|---|
| Blastx | WD repeat-containing protein 44 from Bos with 31.4% of identity |
| Eggnog | WD repeatcontaining protein(ENOG410XQPJ) |
| Kegg | Link to kegg annotations (286825) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417475.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |