Ll_transcript_330082

• Id Trinity: TRINITY_DN49027_c3_g1_i1
• Name Transcript: Ll_transcript_330082
• Sequence: CGTTGTCCCTGAGTATGTCTTCAAGTGTGTATCAAATTAATCAGAATGAAGAAAAAATAAATAAAATTAATTATATTTAATTTTTCAACTGATATGTTAT ACTGTGTAATTGGTTTAGTACACACTTTCGATATAATTTATGATAGAAGATCATTGTGCTAGAAACAACACAACACACAAAGAATTCAATTCTAATACGC GTAGCTCAAATTATTTTAAAATTAAAAAAGTAATATTTTTCCATTTCTCAATCTGGGTCGTTCAATTTATCTGCTCTCTCTCACTTTTCAACCTTCTCTT ATTTTCTCTCTCTTCTTCTCAGAAACAAAGGAGGAAAAACAATATTTCTACAAGTTTTTCATATTACCCAAATTAAAAAAATAATATTTTTTCCATTTCT GAATCTGGGTAAAGTTCAGTTTCTCTTATATCTCTCACTTTTGAATCTTTTGTTATCTCTCTCTTCCTCTGATATTTATATAAAAAAAGCATTTGTATTA TTTTGTTGTTTGCCTAGCAAGTACTCTGGTTCTGAGTACTGACAGAACCTATTGTTTTGGATCTATGATTTGTATTATAATCATTATTCTATGCACTGAG TTTGTTGGTGAGTACCTCTAACACATGTGGGATTTTATTCCTTGCCTCCTAAACATAAGCAAAGTTTCATTTTTAATTTGATTTTATGTTTTTTAATCAC TTATGACCGTGATTTTGGGACACTTACATGCTCTTATATTTCCTTGCCTTGTAGTGCAAAAAAAGTTGAACTTTTCTCTCTTTTCATACCCAACAAAATT ATAGCTCTAGTTTGGTCTCTAAGTAATGCAGAAAAAAAGCATGTATGTTGTACTTGCTTAGTGTGAGTGAGTGAGTGTTCATGCTACTAGCTATTTTACT ACTATCCAGTTTTTATAGAAATTGTATTCCCAAAAGCTCAAATTTGAGGCCTTAAACTTACTAGTTAGTTAAGTTTGAGTGCTATATATATATATATATA TTGTTGAGGGGAAAAAAGAGAGAGGAAAATGGGATCTGGGAATGAGGTTCATTCGGTTGAAGATTTCAATTTAGATGCTAAGTGGATTATAGATCCAAAA GAATTATTTGTTGGTCCAAAAATTGGTGAAGGTGCTCATGCCAAAGTCTATGAAGGGAAGTAAGTCAAGATTCTTTGTGTTTTGATTTATTTGAGGTTTT ATTTTATTTTTTTGAATCAAATTTGGTTTTTAAATCCAATTTCATAGTCACAGTTTGATTGCAGATATAAAAATCAGAATGTTGCTGTTAAGGTTATCAA CAAGGGAGAAACTCCGGAAGAGATTTCGAGGAGAGAGGCTCGGTTTGGTAGAGAGGTTGCTATGTTGTCCAGGGTTCAACACAAGAATCTGGTTAAGTTT ATTGGGGCCTGCAAAGAACCGGTTATGGTTATAGTAACTGAACTTCTATTAGGTGGAACATTGCGCAAATATCTCTTGAACATGCGGCCGAAGTGTTTGG ATATGCGAGTGGCAGTTGGATTTGCTCTTGATATTGCTCGAGCGATGGAATGCTTACACTCCCATGGGATCATTCACCGTGACCTTAAACCTGATAACTT GATCTTGACAGCAGATCATAGAACAATTAAACTTGCTGATTTTGGTCTAGCCAGAGAAGAGTCGTTAACGGAGATGATGACTGCTGAAACAGGAACGTAT CGTTGGATGGCTCCAGAACTTTACAGCACCGTGACTCTAAGACAAGGCGAGAAGAAGCATTACAACCATAAGGTGGATGCGTACAGCTTTGCAATTGTGT TGTGGGAGCTCATCCATAATAAGGTGCCCTTTGAAGGCATGTCTAATCTACAAGCAGCATACGCAGCCGCTTTTAAGAATACTAGGCCCAGTGCTGAAGA CATTCCTGAGGATTTAGCTTTGATTGTAACTTCATGTTGGAAAGAGGATCCAAAGGAACGACCGAATTTTACCGAAATCATACAGATGCTCCTTCGGTAT CTCTGTACTATTTCACCATCAATGTCGGTGGCTCCTTTGCAGAGGATGACTTCATCTGAGAATGCTGTGTTGCCACCGGAATCACCTGGTACACGCGCCT TAATGGCGACAAGAGATGATTCTATAGAAACACCAAAAGCAGCCAATATGGAAGACAGGCCTAAAGGGTTTTTGTTCTGCTTTAACCATTGTTATTGATT CCTCAAAACACATAATTTTGATTCTTAGGTAATTTTGGAATGTAATATATCATTGTAAAATAAGGTTCATCCAAAATGTTTATGTGGCACTGATAATAAA ATAAAAGTGGAAAATGTTTACTTAGCATTGATGATGAAACTTTGTATCATATTCCAATTCATTTAATTTGCTTTTCTATGTTGATGCTTCTATTTGTAAG ATAATTGGTTTCAACATTATCAATGCCAACAAAAGTGGA
• Tissue: pods
• Gene name: LI_gene_165920;
• Additional information: details;

Expression of Ll_transcript_330082

FPKM

• PAB: 2.4
• PNAB: 0.3
• PS1: 0.8
• PS2: 0.4
• PS3: 0.5
• PW1: 0
• PW2: 2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330082

• Blastp: Serine/threonine-protein kinase HT1 from Arabidopsis with 42.26% of identity
• Blastx: Serine/threonine-protein kinase HT1 from Arabidopsis with 37.43% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G62400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442512.1)
• Pfam: Protein tyrosine kinase (PF07714.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;