Id Trinity | TRINITY_DN49027_c3_g1_i2 |
---|---|
Name Transcript | Ll_transcript_330083 |
Sequence | CGTTGTCCCTGAGTATGTCTTCAAGTGTGTATCAAATTAATCAGAATGAAGAAAAAATAAATAAAATTAATTATATTTAATTTTTCAACTGATATGTTAT ACTGTGTAATTGGTTTAGTACACACTTTCGATATAATTTATGATAGAAGATCATTGTGCTAGAAACAACACAACACACAAAGAATTCAATTCTAATACGC GTAGCTCAAATTATTTTAAAATTAAAAAAGTAATATTTTTCCATTTCTCAATCTGGGTCGTTCAATTTATCTGCTCTCTCTCACTTTTCAACCTTCTCTT ATTTTCTCTCTCTTCTTCTCAGAAACAAAGGAGGAAAAACAATATTTCTACAAGTTTTTCATATTACCCAAATTAAAAAAATAATATTTTTTCCATTTCT GAATCTGGGTAAAGTTCAGTTTCTCTTATATCTCTCACTTTTGAATCTTTTGTTATCTCTCTCTTCCTCTGATATTTATATAAAAAAAGCATTTGTATTA TTTTGTTGTTTGCCTAGCAAGTACTCTGGTTCTGAGTACTGACAGAACCTATTGTTTTGGATCTATGATTTGTATTATAATCATTATTCTATGCACTGAG TTTGTTGGTGAGTACCTCTAACACATGTGGGATTTTATTCCTTGCCTCCTAAACATAAGCAAAGTTTCATTTTTAATTTGATTTTATGTTTTTTAATCAC TTATGACCGTGATTTTGGGACACTTACATGCTCTTATATTTCCTTGCCTTGTAGTGCAAAAAAAGTTGAACTTTTCTCTCTTTTCATACCCAACAAAATT ATAGCTCTAGTTTGGTCTCTAAGTAATGCAGAAAAAAAGCATGTATGTTGTACTTGCTTAGTGTGAGTGAGTGAGTGTTCATGCTACTAGCTATTTTACT ACTATCCAGTTTTTATAGAAATTGTATTCCCAAAAGCTCAAATTTGAGGCCTTAAACTTACTAGTTAGTTAAGTTTGAGTGCTATATATATATATATATA TTGTTGAGGGGAAAAAAGAGAGAGGAAAATGGGATCTGGGAATGAGGTTCATTCGGTTGAAGATTTCAATTTAGATGCTAAGTGGATTATAGATCCAAAA GAATTATTTGTTGGTCCAAAAATTGGTGAAGGTGCTCATGCCAAAGTCTATGAAGGGAAATATAAAAATCAGAATGTTGCTGTTAAGGTTATCAACAAGG GAGAAACTCCGGAAGAGATTTCGAGGAGAGAGGCTCGGTTTGGTAGAGAGGTTGCTATGTTGTCCAGGGTTCAACACAAGAATCTGGTTAAGTTTATTGG GGCCTGCAAAGAACCGGTTATGGTTATAGTAACTGAACTTCTATTAGGTGGAACATTGCGCAAATATCTCTTGAACATGCGGCCGAAGTGTTTGGATATG CGAGTGGCAGTTGGATTTGCTCTTGATATTGCTCGAGCGATGGAATGCTTACACTCCCATGGGATCATTCACCGTGACCTTAAACCTGGTATATGCCTAT ATGAATGTTGAAGTTGAGCTAATCACTTGATCGAAATGACTGTGATGTGTGACTGTGCTATAGTTCTGTTCTGCCGAATTTTGCATCCTGCATCAATTAC ATGTTGTCTTATTATGTGCCAGGGGTTGCTGATCTTGATTTGTAAGACCTTTCAAGTAAATTGAAATATAGTCATTGTTTTTGTTTGCTGCTATGAGTCA CTATGCAAAAATAGGCTTTATTGCTTTATGTTGTAAATTTATGCAACAAAGTCTATATTTCTTCCCTTTATATAGTAAGACCATATTTCTGTGCTAGCCG TTCTTGGCCGTTGAGTTTGTGATGATAAGGAAGTTTGGTCCTTATTATAAGGCAAGGAAAATACTTACTTTTCTTGAATTTTTAAAACGATACTATAAAA TTACAATTTTACCCTCTTAACTCTTCTCTTGAATTATGTTTCGAATTAATGAACAATGGTTAAATAATAGGAAAAAGCAATAAATCTTCTGTAGAAAATA TAAAACGCCTTATAAAAAGGATCATAAATTTTTTTAGAGGGTGCCTTATAACTTATAAGAAGGAGCATAGGGAATATATCTAATAACTTGTTTCTTCTTT TGTTTATTTCCAGATAACTTGATCTTGACAGCAGATCATAGAACAATTAAACTTGCTGATTTTGGTCTAGCCAGAGAAGAGTCGTTAACGGAGATGATGA CTGCTGAAACAGGAACGTATCGTTGGATGGCTCCAGAAGTACTTACCTCTTAATTAATGAAAACTTTGTTAACATTTATTAATTTTCCGGTTGGTTGGTT CCATATTATGTAATTTAGATCATTACATTCCTGTTTTGTGGCAGCTTTACAGCACCGTGACTCTAAGACAAGGCGAGAAGAAGCATTACAACCATAAGGT GGATGCGTACAGCTTTGCAATTGTGTTGTGGGAGCTCATCCATAATAAGGTGCCCTTTGAAGGCATGTCTAATCTACAAGCAGCATACGCAGCCGCTTTT AAGAAATATTTGATTGTTTCAGAATACTAGGCCCAGTGCTGAAGACATTCCTGAGGATTTAGCTTTGATTGTAACTTCATGTTGGAAAGAGGATCCAAAG GAACGACCGAATTTTACCGAAATCATACAGATGCTCCTTCGGTATCTCTGTACTATTTCACCATCAATGTCGGTGGCTCCTTTGCAGAGGATGACTTCAT CTGAGAATGCTGTGTTGCCACCGGAATCACCTGGTACACGCGCCTTAATGGCGACAAGAGATGATTCTATAGAAACACCAAAAGCAGCCAATATGGAAGA CAGGCCTAAAGGGTTTTTGTTCTGCTTTAACCATTGTTATTGATTCCTCAAAACACATAATTTTGATTCTTAGGTAATTTTGGAATGTAATATATCATTG TAAAATAAGGTTCATCCAAAATGTTTATGTGGCACTGATAATAAAATAAAAGTGGAAAATGTTTACTTAGCATTGATGATGAAACTTTGTATCATATTCC AATTCATTTAATTTGCTTTTCTATGTTGATGCTTCTATTTGTAAGATAATTGGTTTCAACATTATCAATGCCAACAAAAGTGGA BLAST |
Tissue | pods |
Gene name | LI_gene_165920; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330083
Blastp | Serine/threonine-protein kinase HT1 from Arabidopsis with 46.72% of identity |
---|---|
Blastx | Serine/threonine-protein kinase HT1 from Arabidopsis with 46.72% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT1G62400) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442512.1) |
Pfam | Protein tyrosine kinase (PF07714.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |