| Id Trinity | TRINITY_DN49037_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_331251 |
| Sequence | TAAAATTCGAAGTTAAAGTTTCCATTTCGATATTTTTCAGCGTTGAAAGGAGGAGAAGAAGAAGAAAGGAGTAGAGAATTGTATCGTGTGTTTGTAAGTT ATAACGAATCAAAACGATGTCGTCTCCAGACATTGCAGCAATTTTGGAGAATTCGAAGGAACTTGATCGGTTACGAAAAGATCAGGAAGAGATTCTTCTT GAGATCAATAAGCTTCACAAGAAGCTTCAAACAACTCCTGAAGTGGTTGAGAAGCCTGGGGATAACTCATTAGCAAGGCTTAAAGTGTTGTACACTCAAG CAAAAGATCTTTCAGACAGTGAAGCAAACATTTCCAATTTGTTGATAACCCAACTTGATGCCATACTACCTCCAGGACCACAAGGGCAACCACGAAGAAG AATAGGAAAAGAAGGTAACGAGCAGAAAAGGAAACGAGTGAAGACAGATTCAGATATTTCAAGGCTAACTTCTAGTATGAGAAACCAACTTGAGGCTTGT GCCAGTCTTAAGGGCGAACAGGTAGCTGCTAGGGTCACTCCACGTAATGCTGTAAAGGACGAGTGGTTTGTTGTAAAAGTGATTCATTTTGAAAAGGAAT CAAAGGAATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGATAGCAGTGGCCAAAGACAGTACAAGCTTCCCATGGGAAATATCATTCCTTTCCC CAAGAGTAATGACCCTTCAAGTGCCCCAGATTTTCCTCCTGGAAAGCATGTTTTGGCTGTATATCCAGGAACTACTGCACTTTATAAAGCAACAGTTGTT CATGGCCATCGGAAGCTATAACTTCGGTGACCTGGAGATCGTACTAACCAGTTGTGATATTGTGCATGTTGCGTGGTAATCTCCACCATTTCACAATTGT GCAGAGGAAGACAGATGAGTAAGTATAATCTGTTGAACTTCAAGGAATTTGTTTTCAGTTCCAAATTTATTTGTCATTGGTAATCAAATAGTATAAAAAA GACGGCTCGGTGTACGAGGCTCCCACTTCGTGGAGTCTGGGGAGGGTAGATGTGCCGTGTGCGCAGCCTTACCCCCACAAGTGGAGAGGCTGTTTATAGG ATTTGAAGTTTTGAACATATGACTTCATGGTTACGGAGCAACAACCTTACCGTCGCGCCGAGCTCACCTCATGTAACTTGATTTTTTTTTGCATCAAGTT TTTTTTATGACATGGTATCTCAGTACTCAGCTGTTCATTATGAATGGTAATTTTTCCTTGGATTTTCAAAAGAAATGTAGTTTTTACTAAATATCATCTT CAAGTATCATCTCTTGGAAACACCATAGTGGTTGAAAATTCTGACTTGAAGTTACAAATACAAATCTTATTGGCAGGACACTAGATTTATAAACGAGAAA TGCCAATTCTTCCTACAAGACTAGCTTAATAATCTTCCGAACTACCTCGGAGGAGAAAAAAACATTTCTTTCTTTAGTAACTAGGAGAATTACTAGTTAA AAGGATTTAGATTTCTCCTTATTGTAATTTATGTAAATAAAAAGGGCTAGCCCTTCCCCGAAGCCAGGTTTGTTCACACTGTCGAGTACCATAAAGACAG TACAACAACAACCAAATCTTTATCCCACAGGTAAGATCGGCCCCATAAAGACAGTATGAGTAAATATAAATACGTGCATTAAGAATCTGAGTTCAGTGAA AATATTGAAAAGATAAAGTTTGTGCACATCATTTTTTGTTTATGCCATTTTACATGAAATTCTTGATTCTTACCAATTGCTATGCCAGAATTCAGATTAA TGATGGGAACAGTTATGGATTTTGGATCTTTATATTTTAAGTTCAGCTGTTATTTTTGTCTCTTAATGTTATGTTTCTTTTTTTGTGGTGATTGGAACAG TTATGTGCTGGAATTTGATGATGATGAAGAAGATGGATCTTTACCACAAAGGACAGTGCCCTTCCACAAAGTGGTTCCTATGCCAGAAGGACATCGCCCA TGAATTTAAGAGATTGATAGTAATGATGGCCTAAGTTTTTAGCAAAAGTTTTTTTTTGTTGAGCGAAAGTTTAAGCGAGTTGAGTTCTGAAGGGCGAGTT GAGTTCTGAAGGGTTACGAAAGGCCACGGCATGTTTCGTAATTCGATGAGTGCTTATAGAATTATTTACAAACTACTCACCAACAAGGTTTTTATATCAC CAACTTGGTCTTTGACAATTTGATCTTTGAAGTTATAGGGCATATCCATTATACTTTAAGAAATTTATAGGAATGTTAGGTTGCTTAACAAATTATGTTC TCTGCTACAGTTTAATGCATATCCTTGCATATATATGTGTGCAATATTTATTTTATAAATAATATAACACTATTGTTGAAAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_166016; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331251
| Blastp | SAGA-associated factor 29 from Mus with 27.31% of identity |
|---|---|
| Blastx | - |
| Eggnog | SAGA-associated factor 29(ENOG410XPFD) |
| Kegg | Link to kegg annotations (75565) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447449.1) |
| Pfam | SGF29 tudor-like domain (PF07039.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |