Ll_transcript_330192

• Id Trinity: TRINITY_DN49039_c0_g1_i5
• Name Transcript: Ll_transcript_330192
• Sequence: GTGAGTCTTCTTCTCCTTTCTTCAATTAAGCACTGCCTCAAACTTCTTCAATTTCTATATTTTAGCTCAACCTTTTCTCCGCTGTTTCCTTTAATTTGCA TCTTTATTACCTCTCCTAATTCTTACTTTTATCTTTTTTAACTTGTTTCTCTTATGCGATAATCAGATTTTCTGCATATATACCTCTCAACCTTTAACAC CATGAAACTAAATAAATCCCTTGTCTTCAACTCTTTGGATCTTGTCTCGATTATGATAATATATGCTTCTTCAGTTTTTTTTGTTTATTTAGGCTTAAAT ATGTTTTAGTGTCTGAAAATATCGGCAAATTTGATTTTTGTAGTCCCCAATTTTTACCCTTACACTTTAGTCCTTACTTTACTTGATTGTTTTGGTTTTA GTCCCTGTTAGCATCACAATTGGCTATGTTACCCATTAGTATGACACATGTTACCTGCTGATGTTGTTCATGTTGTCTATTTACTCCTTTTTATTTTTCA TTTTAGAGGTTTGTGTTGAATGGGGGCAGAGAATGAAAGCCTATAACTTTTGAAGATTATGAATTTTCTCAAGTTCCTATTTTTTAGCGTAGCGAATAAC ATGTCATGGTTATGTATGGTGGTATATAATGTATATATTTTCATGTGCTAGTTATTGACAAAGTAAACCTTTTCATCGGTATGTTGCCAGACACTAACTT GAACTAGAAGCCTTGACAAAAAAATGCTCCCTCCACGTCAGCAATCTCGGGTTGGAGGACTTCAAACTTCTCTATCTCTAGTTTCGTCTGATCCTCGTCT TTCTCCAGAGGAACCTCGATCAAACTCTGACAATATACATGAGTCTCCAACTGAAAGTGCAAGCTCTCGAGAAACCTGGCCTACTGGTGATGCAATTGCA GTGAAGAAGATGGAGAATGGAAAAGCTGAGATTGATATCCCTGAGAAGTCAGTTATTCGTCGTGTTTCCAGTGCAGACAAAATTAGTCTCCAGGACATTG CAAGAGAAAATGTTGATATAATCTGCGAAAAAATGCATCACCTACCTGAAGAATTTCTGGAAGAGCTAAAAAATGGACTTAGAGTTATCCTTGAGGGAGG TAACGGCTCACAGCATAGAGAGGAGTTTTTCATTTTGCAGAAGCTTGTTCAGAGTAGATCTGATTTAACAGCCAAAACATTGATTAGAGCACATCGCGTG CAGCTTGAAATCCTTGTTGCCATAAATACTGGAATTCAGGGATTCTTACATCCTAGTATCAGTCTATCACAGACTTCTCTAATTGAGATTTTTGTGTATA AGAGATGCAGAAACATAGCTTGTCAAAACCAGCTTCCAGCTGATGATTGTACATGTGAAACATGCACCAACAGTAACGGTTTCTGCAATCTTTGCATGTG TGTAATCTGCAGCAAGTTTGACTTTGAAGTTAACACATGCCGCTGGATTGGATGTGATTTGTGTTCTCATTGGACTCACACAGATTGTGCCATTCGTGAG CAACTTATTTGCATGGGCCCTTCTGTGAAGAGTGGAGTAGGACCAAGTGAAATGGTTTTCAGGTGTCAAGCATGCAGTAGGACTTCAGAACTGTTGGGTT GGGTCAAAGATGTGTTCCAGCATTGTGCGCCATCATGGGATGGGGAGGCCTTAGTGAGGGAACTCGATTTTGTTAGTAGGATCTTTCATGGTAGTAAAGA CACGCGAGGGAGGAAATTGTTTTGGAAGTGTGATGATCTCAAGGGAAAACTGAATAGTGGAAAAGTGGATGCTAATGCAGCATGCAGGGCAATATTGATG GTTTTTCAAGAGCTTGAGATGGACTCTCCAAAGAGCCTGGAAAATGCAGAAAGTGAAAGGCTGGTTGCTCCACAGGAGGCATGCAATAGAATTGCAGAAG TGGTAAAGGAGGCTATAAGAAAGATGGAAATTGTAGCTGATGAAAAAATGAGAATGTTCAAGAAGGCTCGTTTGACTCTCGAAGCTTGTGACCGTGAATT AGCAGATAAGGCGAGAGAAGCAGCAGAACTCAAGATGGATAGGCAAAAAAAGAAGTCACAGATTGAAGAGCTGGAGAGAATTGTGAGGCTTAAAAATGCT GAGGCTGAGATGTTCCAATTGAAGGCTAATGAGGCTAAACGAGAGGCTGAGAGGCTCCAGAGGATAGCCCTTGCCAAGTCAGATAAATCAGAGGAAGAGT ATACTAATAACTATTTGAAACAAAAATTAAGTGAGGCTGAGGCTGAGAAGCAATATCTGTATGAGAAGATCAAAATGCAGGAGAGTTCTCGTGTATCACA GAGCAGTAGTGGTGGTGACCCCTCTTCGATGCTGATGTATTCCAAAATCCATGATCTTCTCTATAATGTTCCTCCAATGGCAGATAGTCAATCCAATGAT TGTCACCCTCTCCGATCAAATCCATGAGTATCGGTTCAGTGTGTGTTATAATCTTTTACATAATATATATAGCTATGTCATGGTCATGTTGAACAATTGA TTAAGAGTCGATCTAATTTAATTCTATTAGATTCAAGGGTAGTGGTAAAGGCTTAAAATCACTGTGAAACTAGGATTGCTCCATGGATTGTTTGTGTGGA TACATGCTTTTGTTATTAGTTATGTATGTGTGGCATAAATTGTGTGATTTAACTAGTTGATTAATATATATGTAATTAGTTATGTATGGATTTGTGAATG GTTTGATTACAGAGGATGGTGTGTTTGTTATGGAC
• Tissue: pods
• Gene name: LI_gene_166030;
• Additional information: details;

Expression of Ll_transcript_330192

FPKM

• PAB: 7.3
• PNAB: 9.3
• PS1: 11.3
• PS2: 10.1
• PS3: 11.6
• PW1: 12.7
• PW2: 13.9
• PW3: 11.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330192

• Blastp: OBERON-like protein from Pisum with 87.77% of identity
• Blastx: OBERON-like protein from Pisum with 86.8% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435735.1)
• Pfam: PHD - plant homeodomain finger protein (PF07227.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;