Id Trinity | TRINITY_DN49043_c5_g2_i4 |
---|---|
Name Transcript | Ll_transcript_331902 |
Sequence | AGATTCCGAAGTCACATGATTACGAAATATTAAGATGCAAATATTTCTTAGCTTATGATACTTCCGAATTCCAATTTTTCAGGAGAAACAAACAATTGAT AGAGGAGCTTAGTACACCACCCCAAGGTTCAACAGATTTATACTTTGATAGTCAGTACTCACAGCCTTTCTGGGCACAATGCAAAGCTTGCCTATGGAAG CAACATTTATCGTACTGGCGAAACACATCGTATACCGCAGTTAGACTCCTATTTACAACAATAATAGCTATATTGTTTGGGATGATTTTTTGGAACATTG GCCTGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGATCAATGTATGCGTCGGTTATCTTCATCGGGGTACAAAATGGTGCCTCGGTGCAGCC TGTAATAGCAGTTGAGAGAACAGTCTTCTATAGAGAGAGAGCTGCAGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGTTATTATTGAGCTTCCC CATGTCTTGGTTCAGACTCTAATATATGGGATTATAGTATATGCCATGATGGGATTTGAGTGGACAACAACAAAGTTCCTATGGTATCTCTTCTTCATGT ACTTCACATTGTTGTACTTCACCTTCTATGGTATGATGACCATGGCTATCTGTCCGAACCCACACGTAGCAGGCATATTATCTAGCACATTCTATGCAGT ATGGAATCTTTTCTCCGGCTTCGTCATTCCTTTATCGAGGATACCAATATGGTGGAAGTGGTACTATTGGATTTGCCCTGTTGCATGGACATTATATGGA TTGGTAACATCACAGTTTGGAGACCTCATGGACCAACTTGATAATGGTCAAAGGGTTGAAGAATTTGTAACAAGTTACTTTGGATTTAAACATGATTTTC TAGGAGTTGTTGCAGTTGTTGTGGCTGGATTTTCAGTGTTGTTTGGTCTTGTCTATGCCATTGGAACCAAAGCATTCAACTTCCAAAAAAGATGAAATCA TAGTGCAATTCTCTCTATGAAGACTATTAAAAAAAACTCAATTTGGATATGATATAATCCATGGTTTTTTATAACAATGTCTATTTATTTATTTACATGT TCTAGCATGTAATTGAACATTTACTTATTTGTAGTTATCAAAAGAAGTATATAGATACACATATCTTAAAGTGTTGTATATTATACATTTGGTTATGTAG CATACTTAAGATCCAACGATTCATATTATTTGTTCTCATTTCTCACAATAACGCATTGTTCTCACGTGAGTACCTATATATATGGGTGTGTTCTAATTAT TTGTGAGGTTTTGAATGGTTCTTACATGATTGTTTTTTGGCTGGAATTTTTTCAGGTCATGGCATCTCAAGGAAATGGAGGCCACCACTATGATAACAAG AGCAAATATGGACCTGGCAGTCTCAAGAGCTATCAATGCCCCTCACAATGCACAAGAAGGTGTAGCCAGACCCAGTACCACAAGCCCTGCATGTTTTTCT GTCAGAAGTGCTGTAGGAAGTGCTTGTGTGTGCCCCCGGGGTATTATGGGAATAAAGCTGTGTGCCCTTGTTACAACAATTGGAAGACACAACAAGGAGG TCCCAAATGCCCTTGAACACATCATATAGCTTCTTTCATCAAATTTAAACCGATTTTAAGAACAACAATCAAACCTTAATTTCGGCCGAGAAGGTCGGCT CGGCTCCACATAATTAATATTTCCTTTCTTTCCCTTTTTGGTTCTCTATATATGTGATGTAATATGTTAGTGAGGGTATGTGGGCACCTCATAATGCCAC TCCTTAAGGCATTTTTTGCTCAAGTGTTGGATGGTAGTGGCTAATATTATGACTTTCATCTATCAATGAAATTTCTAGTGTTTTGTTATCAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_166059; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331902
Blastp | ABC transporter G family member 53 from Oryza sativa with 66.77% of identity |
---|---|
Blastx | ABC transporter G family member 37 from Oryza sativa with 64.35% of identity |
Eggnog | (ABC) transporter(COG0842) |
Kegg | Link to kegg annotations (9269190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447532.1) |
Pfam | ABC-2 type transporter (PF01061.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |