Id Trinity | TRINITY_DN49047_c3_g1_i3 |
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Name Transcript | Ll_transcript_330138 |
Sequence | AGGTGAATCCTCTGGACTCAACATTTTCATACCCCGCCTATTAAATGACTGCATGGGAGCGAGACCTTTAGACTTTGTACTTGACTTGCAACCTTTTTCA CCTCAAGAATTTATTGAGCATATCACTCAATACTCATTACACTTATTAATCCTAAAGGTGAATCCTCTGGACTCAACAAACCCTCTATCTTCGAGACTTA TATTGAAAAATTATTTGAGTTGATACAAGTGAGGCCAGAATGTGAAGGCATTTGTATACGAATCAATAACCGCCATGCGGTAGACCACTCATGTGAAGCC AGTTGCACCTTTATAATTGGATTACAAAACAAAAATTCAACTCAGCGCCACATAGTATGATTAAATTCCAATTCCGACATCATTAATCCCGTGTTTCAAT ATTTCGTTTTTCAAATTTTTGCGCTCACTCGCACGGAGACAGAAGAAACTGTGTATCAACAATGGCACCACCTACAGAGGGAGACATGGTTCTTCGGTTA TCTTCTCATTCTGACCCCACAATCGTGTCAGTTAACCCTATTCACTTCTTTTTGATATCTATTCAAATTCACGAATCACATTGTAGCGTTGATTGCTCTT TTGTCTTCTTTCAGAGAGTACAAGTTTGCCAATGTGGAGAATTTGGATTATTGCGCCAAGTATTTGAACCAATCACTCGTAATGTTTGGGTTTCCAGCGT CCTTGGATCTCTTCGCTAACGACCCTGTTTCAATTGCGCGGACTTGCAATTGCTTATACTTTTTGCTTCAACAGAGAAAGTGTGACTCGGAATTTAGAGA GTCTTCTCATGAACAAAGACAGCGACAATTATCTGACATATCTATATTGGAGGCCAAGGTTGAGAAGCTTGAAGAACAACTGCAAGCCAAAGACAGGGAG ATAGCAACCATTACTAGAAGAGAAGCTAAAAGCACTGCTGCTCTCAAGACCCAGATAGAGAAGCTGCAATATGAGAGGGATGAATTTCAGAGAATGGTTA TTGGTCATCAGCAAGTAAGGACTCAACAGATGCATGAGTTGAAAAAGAAGGAAAAGGAATACATAAAGTTGCAGGAGAGGTTAAATCAAATATTGATGGA GAAGAAGAAGGAATCTAAGTCAGGCATGGAGATAAGGAATTTGCTACAGAAGGAAGGGCGGCAACGTGGAACATGGAATGGGAAGAAGGCTGACAATGAT TTTTATAAAAAAATTGTGGACACTTATGAAGCAAAAAATCAAGAGCTGATGGCAGAGAATGCTGATTTAAGAGCATTGTTGAGATCGATGCAGGTTGATA TGCGTGATTTTCTAAATGCTCCTAATAGCCTGCCAAAGGAATCTTCCACTGCCAATGAAAGAGTTGAAAGTGATCCTTCACGGTCTCAATTGGTTGAGAG AACGGATGTGTTTGACCTTCCTTTTCACATGGCCAGAGACAAAATAGAAGAAAGTCTACGAAACAAGATGGCTTCCATAAAGGAGCGCATGGTTCAATTG CAAGATGATCAGAAAGGAGCAGACGTTACTTCCGAAGCTACTGAGAGGGAGCTTGAGCTTGAAGCTCAACTTGTTGAAGCAAGGAGCATCATACAAGAGC AGGCATCAATAATGTCTAAACATATTGCAAAGTCTGATAGGCCAAGGGAATCTCTCATTCCAACATCTGCTGAGGTATGTATTTATATGCATGTTTATTT TCCTGTTTTGAGTGAGAATCCTGTTATTTGTAATATTTTTTTCATATATAACTGAGATCCTGAAGGCTTTCATAGTGTCACTATGTTGTGGATTTGTACT GTGGATAAGTGGCTGGTTAAAAGTAGCTTTTAGAGAATTATTTGTAATGAGATGGTATAGTTTATTTTGTAAGGAGAATTATTACACTTTTTCCCTATTG ACAAAAGAATGGATCAAAGTATTAATTGTGGCATGGTCACTGTGTCTGAGGTTTCCCACGCTGTTTCTTGTATCGAGTCGATACTTTTATCCTCCCCGCT TAATTTTGATTAAACATAGGATTATAGATTCAGCGTGGTAAAGTTATTGCTTTCATCGCATCCTGTCTAGCAATAGATTTGTTGCCACTTGTTCCCCAAT CGCCACGTTGATGATGTCTGCATTGTGTTTCTTGATTTACAGGCAGTGTAACTAGTAGCAAAGCTGAAGCACCCATATTTGATGCTTGGCTTGATTAAAT TGGCTCTGTAGTTTACCATGCAGGAACAGGGAGCTATAAGCATGTCATTGCACCCGCGCCTATGGTAGAATCTCGTTCTGTAATTAGTATTATTAGTATA ATGTAATTAGTGTCATTTCACCCTTGGAAATGCTCCTAGAAGAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_166084; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330138
Blastp | Afadin- and alpha-actinin-binding protein from Mus with 27.87% of identity |
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Blastx | Afadin- and alpha-actinin-binding protein from Mus with 28.31% of identity |
Eggnog | cell adhesion(ENOG410XWZ9) |
Kegg | Link to kegg annotations (99167) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464152.1) |
Pfam | Afadin- and alpha -actinin-Binding (PF11559.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |