| Id Trinity | TRINITY_DN49048_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_331055 |
| Sequence | ATTTTTTTCGCTACTTTGTTTTGGCTAAGCTAAAGCTCTTCCAAAGTGCAGGTTCAATATTGTGACACTAATGGGTCACCTTCTGAATCTACTCCATGTA ACATCTTTCTTAACCAAACTAACTTTCTATCACTTCCCCAATTTACTTCACCACAATACATGTTCTTATCCTCCAAAAGTTTCCAAATTTCAGAAATATC ATGCTACCCCATTGGCTTTGCAAGGTAGTGGGGATATAGCAGGTCATGTTGAGAGCCCATTTAAGCATAAGGTAATATGCAGTCTAGGCTCCAATTTTGT TTGTTTTCGAGGATAAAATTGCGTACATCTACCATTTCCGGAATCCGGACCTCACTGGGTGGAGCCTCGCGGGTTAAGCCATGCTTTGATATTCAGTTTG TTATGATTGAATGCCCCATAATTTTAACATTTTTTGAAGTTTTATACAATTACTAATGCTTATACTTGGAGTATCAGTATTTGTTTGCTTCAATAACTTG TAAGAAGGAAAGAAAAATGCGAGTTTGTTTTGCATAGCTAGTTATTAAGGTAGTTGAAATGTTGTAAGATAAGCCCCTAACTTATAAGTCCATAAGTTAT CTCTATTCTCTAGTAGCTAATCAAATATGGGCATATAAGCTCCTAGCATATTGAAATAAGCCCTTTACCAAACACCTGAAAGTAGCTTATTTTTTGTCAA ATAAGTTAATTGAATAGCTTATAAGTTGTTTGATGGTGTTGCCAAACACACTCGTAAAGCTTCAACCACTCCCTCTAACAGTCATTTTGTGCTCTCCTCA TGAGTGTTTCAAGCAGAATTCAATAACTCTATGGTTGATATGAAGGGAATGGGGCAGCATTGTTGCATTTTTTAGCATTGTAGGTTGCTCTTTTTTCCAT TTTAGGATAGTAGGGGATGCCAAGTTATCTCCCGGATGCATTTTCTTTCCTTTTTACATCAAGGATCAACTGTACTAAAAGTTTAAGTTGCTGGGACTTG GGTGTAGGTTAACAGTAGTTATATAAAAAAGGAAGATTTTCTTTCCTTTGGGCATGAAAGGTCGATAAAGCAAAAGACAATCATGTCTTGTGCTAACATT TTAATTGAATTATGAAGGGCAAGTTTTGCAAGTATCACAATCCTGACTATTAGGTCATAAAAGCTTCGATACTATGTCAACTACTTTAATGCAACGGTAA GGTTGCTGATTAGTGACCATAATCTTGGAAACAGTCTCCCCACTTGTGGGGTAAGGCTTTGCATATCTACTCTCCCCTGACCCCAGTAGTTGGAAGTCTC GTGCAATGGGTCACCCAATATGTCGAGTACTAGATCTCCTAAAAGCTTAAGCTATTAGATGTGTACATTATATCTAACATGACCTTCTATGCAAAAACCA CTTTTGGATTGAGGTGTAGACAAATGATATGCCTCTCATACATTGTGCTGAAACTTAATTTAATTATGAAGAAGCTTTAATGCCACTTCAAAGAACAACC ATTCTAGAAACCTAGATTGTCAGGTGCTTCCCAGTAATGATAATTTTTTTCTTCTGGCGTAATGGTTATTGCCATTAATTTCAAAACAAATATGCTTTGG TTGTTTAAAACTGAAGTTCTACCATTTCGTTTTAGTTTTGCTCTTAAATTGTAAAAATCAAGTCTTAGTAGATAAAATCAGAGGTCATTGGTATCTCTAT TAGCTAATCAAATATGGGCATATAAGCTCCTAGCATATTGTAATAAGCTCTTAAATTGTAAAAATCAAGTCTTATGTAAAATATTTTAGCCTAATCTTGC TCTTCGTATTCTTACATGATATAGAGTGATAAGTACAATTATTGGTTGTAGATTTTGTTGTGGCTCTAAATATTATGGTTTTACTCTTAGATTTACATTA ATAATGGAGGAGAGTTGAATGGTATTCCTCATATACAAACTCTTAGAGAATTTCCCAGGGCGGAGCTTTTTGAAAAGGTAGTCATGGTCCGATTTGATTC TAACATATTGCTCAAGCAAGAGTCTAACCAGACGACTCCGTCAGGTTTTAATGCACTTTTTACGATTAAATATTTATATGAAGCTGGAGCAAAGGTAATC CTTGTAAGTGACTGGAATAGAAATGGTTCAGAGCTTCACACAGAGTCAGTTGCAGATTTCTTATCAGAAATTCTCCAAATACAAGTTGTTCCAATGCAAG GCATTTCTTGTAACAAGCTAAAAAACGTGAAAGACCACATTAAAGAGAATATCCATCTTCTGGAGAATCTTTCTTATTTTAAAGACGAAGTTTCCAATTG CTTGGAGTTTGCTAGAGTATTATCGTCGGGAGTCGATATCTTTGTCAACGACTCCTTCTCCAACTCTCATAAAGTTCTAGCATCAACGGTTGGTGTTACC CGCTTCTGCTATGCCTGTATAGCTGGTTTTCACTTTGAGGAGAGGCTCTGTCTACTGAAGAATGTCGGAGAAGCCAGCAAGAAACCATATGTTGCAATTG AGTATCAGTTCCTCTTAATTTGGTGGACCGAAAGGCACTTGATGAAGCTCTAGACATAGTGAGACTTGCTCAAGATACAAATGTACAAATTTTGTATCCA AAAGATTTTTGGTGCCGGAATAAACAGAATCCATCACAACTGCAAGTATTTCCTTCTCATGGAATTTCTGATGGTTGGGTGCCTGTTGACCTTGGACCGG TATCATTGGATGAAATAAGTTCCTTTCTTACAAATTGTAAGAAAATCATGTGGATTGGTCCAGTGAAATTTGTTGATTCAAGTAAATACACAAATGGGGC ATCTAGATTGGCAGAAGTTCTTGATCAGCTAAGCCAAAGTAACTGTGAAATAACTGCAGTTGGAACTACGGCATGCCAACTAATGAGGCAGAAAAAAAGT TCATTATCCTTTATAAGTATGATTGAGAATGCTACAGTTGTCTGGGAATTTCTTAAAGGAAGAAAACTGCCCGGTGTTATGGCAGTAGACAGGGCATATC CTTTTGAAATCAAGTGGAATGATGTTTATTCTGATCCAGCTCAACCTCTTGTTGTTGATATCGGAAGTGGTAATGGGCTTTTTCTCCTCGAAATGGCTAG AAGGAAGCGAGATTTGAACTTCCTTGGTTTGGAGATTAATGAAAAGCTTGTTTTGCGTTGTCTGGATTCGACTCATCAATATGGCCTTAAGAATGGGTAT TTTATTGCTACTAATGCAACATCAACATTTCGTTCCATCGTTTCTTCTAACCCAGGAGAGTTAGTTCTTGTCTCAATACAGTGTCCAAACCCCGATTTCA ATAAACCTGGGCATAGATGGAGAATGCTGCAGAGGTCTTTAATTGAAGCCATAGTGGATCTTCTAGCATCTGATGGGAAGGTCTTTCTGCAATCTGATGT AGAAGCTGTAGCAATAAGCATGAAAGAACAATTTCTCAGATATGGCAAGGGTAAGCTTGATTTGGTGCATGGCCAAAATGAGTGGCTTGAGGAAAACCCT TTTGGAGTTAGATCAGACTGGGAAAAACATGTTTTAGAGCGCGGGGCCCCGATGTATCGAATGATGTTTTCTAAATCATCTGATATTAGTGAAGTTTCAG CTGCAAATGATGTAATCCAAAAAGATGATTAATCCATGAAACCCCTCCAAGGGATTGCTGCTTTTGCAGAATCTTTCTATCACAGAGCTAATGGTTTCTC CCTGTCAGGCAATGTTGCAGGTACACTGTTTTTTCATGAATTTTATCTTATTATGACATGGATAAATTATGAAATAATAAGAGGCTGAGTCTCGGCACAA CAGTAAGATTGTTTGTCTTGTGACCTGGAGGTCATCGGTTCAAATCCTGGAAATAGTCTCCTCACTTGTGAAGGTAAGGTTGCGTGTATCTCCCTCTCCA TATCTTACTAGGTGAGAATCTCGTGTACTAGACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_166089; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331055
| Blastp | tRNA (guanine-N(7)-)-methyltransferase from Nostoc with 40.62% of identity |
|---|---|
| Blastx | Phosphoglycerate kinase from Synechococcus with 36.08% of identity |
| Eggnog | Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (By similarity)(COG0220) |
| Kegg | Link to kegg annotations (alr1845) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442814.1) |
| Pfam | Putative methyltransferase (PF02390.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |