Id Trinity | TRINITY_DN49052_c4_g1_i1 |
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Name Transcript | Ll_transcript_331959 |
Sequence | GCAGCAGCAGCAGCAGCAGCAGCATGAGTCAGATGAAATGGAACCCCAATCTGAAGAAATTAGTGAGAAATCCGAAGAAAAGAAAGCCAAAATAGATGGC CTGGAATCGAAAATTGAGGAAGAAGGCGTGACTCTGGACGTAACAGGGAAGAGCTTGGAGTTCCCGTCATCCTCATCATCATCACCGGAAAGTAAGAAAG ATTCGGCGGTGGAGAGTTTGTATCTATACAAGAATGTTTATAGTTTGATACCGAAGTCGGTGGGTGAACACGTTCGTTTGAAAACCCTCAAGTTCTTCGG GAACGAGATTAATTTATTTGCACCAGGGTTTGGGGACCTCAATGGCCTGGAATGCTTGCACATGAAGATTTCTTCTCCCGCTATTGGTGGCTTACCATTA CATAAGATGAAGGCTTTGAAAGAGCTTCAGCTCTCCAAAACCCCTCCAAGGCCTTCTGCTTTTCCTATTTTGACTCACATTGCTACTCTCAAACGCTTGA CCAAGCTTTCTATTTGTCACTTTTCTATCAGATTTCTTCCTCCGGAAATTGGATGCTTAAAGAATCTGGAGCATCTGGATCTTTCATTCAACAAGATTAA GAGGTTGCCTGAAGAGGTGACTTTCTTGAGTGGATTGATATCCATGAAAGTTGCCAACAATAAATTGGTGGAACTACCATCAGCAATGGCATCTTTGTCC ATGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCGTTGGGATCCATTGAACTTTGCTCAATGCATAGACTGCGGAATTTAAATCTTCAGTGTT TGACATGGAGGGACACACAATTGGAGGTGCCTCTGTGCATCCGAGTACAATAAGCTGCTAAGCGTCTTTCAAATACCTCCATGGATATGCTGTAACATGG AAGGGAATGATGGAGGTGGATGCAACGATGATTGTAGCAGTTATGTTGAAATGGATGTCTATGAAAATAGTTCACAGGAAAATGATATTCATGGCCCTCA TAACACCTCTTCAACTTTATTAACTAGCTCCTCATCTAGCAGTAGATGTTTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAACGCCAGTATTACTTACAG CAGAGAGCTCGACAAGCATGCTTGAACAGCAGCAGGAAGTGGAAAGGTGTAGATCATGATCAGTTGCTGAGCAAAAAGGTTCACAGAATTTCTGAACCAG AAAATGTAGACAGTCTTGCTTCTGAAAGTTGTAGAGAAACTGTATCAGACAAAGGAAACCTGGATGAAAATAAAAAAAGAATATTTTCTGAAGAACCAGT GAACAACAATTTAATTGATGTTGTCAATGATGATGAAGTTATTATTAAAAAGCCGTTTTGTCCAGAAAGTTGCTGCACCGCGGAAAGTAAAAATGAAAAA GATACATCCTTATGCTCCGTAGAGAATATGCCAACTGAACTGGATGAAGCATCCTGTTCAGAAGTTCAGAAGTGTATTTCTAAATCAAAGAGGCCCTCAG ATCAAGATATTGATAATCCCAAACCGTGCAAATCTAGGAAACCGATTGACAATAGCTCATTGTTGTCTAGCCAGTACAGTAAGATCTCATTCTGTGGCAT TGAAGACCATCTATCCGATGGCTTCTATGATGCAGGACGTGATCGGCCCTTTATGCCACTTGAGAATTATGAGCATAAACAGTGTTTTGATTCTCGTGAA GTTATTCTGTTGGACAGAAAAAAGGATGAAGAGTTGGATGCTGTGTTGCTCTCTGCTCGGGCATTGGTCTATAATTTGAAGAACCAGGCTGTGGTTTATA ACTTGCAGGCAGTATCACTGCTTGCGCTCTTTGTATCAGATCATTTTGGTGGCAGTGATAGAGGTGCTATTATCGAAAGGACAAGGAAAGCTGTTTCTGG TTCAAACTATAATAAGCCTTTTGTCTGCACATGCTCAGCTGGGAGCAGCACTGATATAAGTGCTTCAGACAAACCAGTTGTAAACACCACAGAAGATATT ACTCTTCCCATGATTTCTGAAAAATCTCTTCATTCTATAAAGAAAAGGCGAAGTTCAATTGTAGTTCCAATTGGGTCTGTGCAATTTGGTGTATGTAGAC ATAGAGCTTTGCTTTTGAAGTACTTATGTGATCACATGGAGCCACCAGTACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAA CATCATTTTGATTAAGAGAGATGGTATATGGGTTCGAATGCTAGTTGATGCATGTCGGCCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGC AGGTACATACCTCTTACTCGAACAGAAATCTCACCTTCATGTAGAGAAACTCCTGGACCTGATCATTCCTTTCCATCTCTCTCTGCTTGTAATGAGCTTG AGAAAAAAACTTCTACTACTTTAGTCCAGTGCAAACTTGGATCAGTTGAGGCTGCAGCCAAGGTGCGCACTTTGGAAGTGCAGGCGAGTTCATCTGAAAA AATTAAAAACTTTGAATATAATTGCTTGGGAGAAGTTAGAATTCTAGGTGCTTTAAAACATCCCTGCATAGTGGAAATGTACGGACACCAAATATCATGC CAATGGACTCTCTCATCTGATGGTAATCCTGAGCATTGTGTATTGAGATCTTCAATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAAACTATCTAA ATAAGCTATCAGAAGCTGATGAAAAGCATGTCCCTGTGGACTTGGCGTTTTGTATTGCCAAAGATGTCGCATGCGCTTTGTTGGAACTGCATTCGAAGCA CATAATACACCGTGACATAAAAAGTGAAAACATTCTTTTTGATTTGGATAAGAGAGACGATGGAATTCCCACTGTTAAGCTCTGTGATTTCGATAGTGCG GTGCCACTAAGATCACCTTTGCATGCATGCTGCATTGCTCATGTGGGAACACCTCCTCCATGTGTATGTGTTGGAACACCTCGGTGGATGGCTCCAGAGG TCATGCAGACGATGCATGAAAAACACACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTTTGGAGATGCTCACTCTACAAATTCCATA TTCTGGAGTCTCTGATTCAGATGTCCATGACAGTCTGCAGATTGGTAAACGACCAAAATTAACTGATGAGCTAGAAGCATTGTGTTCAGTCAATGAACCG ACAATGATTCAATCTGTTAAAGTGGAAGAAACAGATGCTGAGGTAGATATGTTGAAATTCCTTGTTAATTTGTTTGGTAAGTGTGTCGAAGAAGATCCAG CAGAACGTCCTACAGCTCACGAAATCCATGAAATGCTGCTTAAATACAACCCCCCTTCAAGAACAAGATGTTAAGAAGATTTAGGTGGAGGGTTATTGGG GTGGTCCTGTCTGGGCCAAATTTTATAATAACCCCTTCGTGTTATATTATTAGAAAATAAAATGTATCCATTCTTTTCAGTTTTTATTTGTAGCGTTAGG ACTTGCTCATGAATAATTAATTATTGTTATCAGGTTTAGTGTGTTCAGTGAGTTATCTCCTGTACATTTTCAAGGGGTTAAAATTTGAATCCAGCCGGCT CTAATGTAATCTGTTTGAGATCTGTATTTGTAATGTACAATCATTTTGTAAGTGGATATGATTAATTTATTCATACCATTCAGCTCTATGCTGTTGTTAG TATAGCATGTTGTCTGCTCAAACTTGGTACTTCTGTGTTTTTTTGTTGCTTTTTTGAAGAATTTTAGAGAACAATGCTTTCTTTATGAACATATTTTTTT GTAAAGCATTATAGTATTGTTTCGTTTGGTTGTAATAAGACATGGTTATTGTTGTTGAAGTAATTTTAATGAACAGGATAGATGTAAG BLAST |
Tissue | pods |
Gene name | LI_gene_166166; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331959
Blastp | Mitogen-activated protein kinase kinase kinase A from Dictyostelium with 30.58% of identity |
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Blastx | Mitogen-activated protein kinase kinase kinase A from Dictyostelium with 30.58% of identity |
Eggnog | mitogen-activated protein kinase kinase kinase(ENOG410XQGS) |
Kegg | Link to kegg annotations (DDB_G0283265) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427520.1) |
Pfam | Ethylene-responsive protein kinase Le-CTR1 (PF14381.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |