Ll_transcript_331968

• Id Trinity: TRINITY_DN49052_c4_g1_i3
• Name Transcript: Ll_transcript_331968
• Sequence: GCAGCAGCAGCAGCAGCAGCAGCATGAGTCAGATGAAATGGAACCCCAATCTGAAGAAATTAGTGAGAAATCCGAAGAAAAGAAAGCCAAAATAGATGGC CTGGAATCGAAAATTGAGGAAGAAGGCGTGACTCTGGACGTAACAGGGAAGAGCTTGGAGTTCCCGTCATCCTCATCATCATCACCGGAAAGTAAGAAAG ATTCGGCGGTGGAGAGTTTGTATCTATACAAGAATGTTTATAGTTTGATACCGAAGTCGGTGGGTGAACACGTTCGTTTGAAAACCCTCAAGTTCTTCGG GAACGAGATTAATTTATTTGCACCAGGGTTTGGGGACCTCAATGGCCTGGAATGCTTGCACATGAAGATTTCTTCTCCCGCTATTGGTGGCTTACCATTA CATAAGATGAAGGCTTTGAAAGAGCTTCAGCTCTCCAAAACCCCTCCAAGGCCTTCTGCTTTTCCTATTTTGACTCACATTGCTACTCTCAAACGCTTGA CCAAGCTTTCTATTTGTCACTTTTCTATCAGATTTCTTCCTCCGGAAATTGGATGCTTAAAGAATCTGGAGCATCTGGATCTTTCATTCAACAAGATTAA GAGGTTGCCTGAAGAGGTGACTTTCTTGAGTGGATTGATATCCATGAAAGTTGCCAACAATAAATTGGTGGAACTACCATCAGCAATGGCATCTTTGTCC ATGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCGTTGGGATCCATTGAACTTTGCTCAATGCATAGACTGCGGAATTTAAATCTTCAGTACA ATAAGCTGCTAAGCGTCTTTCAAATACCTCCATGGATATGCTGTAACATGGAAGGGAATGATGGAGGTGGATGCAACGATGATTGTAGCAGTTATGTTGA AATGGATGTCTATGAAAATAGTTCACAGGAAAATGATATTCATGGCCCTCATAACACCTCTTCAACTTTATTAACTAGCTCCTCATCTAGCAGTAGATGT TTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAACGCCAGTATTACTTACAGCAGAGAGCTCGACAAGCATGCTTGAACAGCAGCAGGAAGTGGAAAGGTG TAGATCATGATCAGTTGCTGAGCAAAAAGGTTCACAGAATTTCTGAACCAGAAAATGTAGACAGTCTTGCTTCTGAAAGTTGTAGAGAAACTGTATCAGA CAAAGGAAACCTGGATGAAAATAAAAAAAGAATATTTTCTGAAGAACCAGTGAACAACAATTTAATTGATGTTGTCAATGATGATGAAGTTATTATTAAA AAGCCGTTTTGTCCAGAAAGTTGCTGCACCGCGGAAAGTAAAAATGAAAAAGATACATCCTTATGCTCCGTAGAGAATATGCCAACTGAACTGGATGAAG CATCCTGTTCAGAAGTTCAGAAGTGTATTTCTAAATCAAAGAGGCCCTCAGATCAAGATATTGATAATCCCAAACCGTGCAAATCTAGGAAACCGATTGA CAATAGCTCATTGTTGTCTAGCCAGTACAGTAAGATCTCATTCTGTGGCATTGAAGACCATCTATCCGATGGCTTCTATGATGCAGGACGTGATCGGCCC TTTATGCCACTTGAGAATTATGAGCATAAACAGTGTTTTGATTCTCGTGAAGTTATTCTGTTGGACAGAAAAAAGGATGAAGAGTTGGATGCTGTGTTGC TCTCTGCTCGGGCATTGGTCTATAATTTGAAGAACCAGGCTGTGGTTTATAACTTGCAGGCAGTATCACTGCTTGCGCTCTTTGTATCAGATCATTTTGG TGGCAGTGATAGAGGTGCTATTATCGAAAGGACAAGGAAAGCTGTTTCTGGTTCAAACTATAATAAGCCTTTTGTCTGCACATGCTCAGCTGGGAGCAGC ACTGATATAAGTGCTTCAGACAAACCAGTTGTAAACACCACAGAAGATATTACTCTTCCCATGATTTCTGAAAAATCTCTTCATTCTATAAAGAAAAGGC GAAGTTCAATTGTAGTTCCAATTGGGTCTGTGCAATTTGGTGTATGTAGACATAGAGCTTTGCTTTTGAAGTACTTATGTGATCACATGGAGCCACCAGT ACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAACATCATTTTGATTAAGAGAGATGGTATATGGGTTCGAATGCTAGTTGAT GCATGTCGGCCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTACATACCTCTTACTCGAACAGAAATCTCACCTTCATGTAGAGAAA CTCCTGGACCTGATCATTCCTTTCCATCTCTCTCTGCTTGTAATGAGCTTGAGAAAAAAACTTCTACTACTTTAGTCCAGTGCAAACTTGGATCAGTTGA GGCTGCAGCCAAGGTGCGCACTTTGGAAGTGCAGGCGAGTTCATCTGAAAAAATTAAAAACTTTGAATATAATTGCTTGGGAGAAGTTAGAATTCTAGGT GCTTTAAAACATCCCTGCATAGTGGAAATGTACGGACACCAAATATCATGCCAATGGACTCTCTCATCTGATGGTAATCCTGAGCATTGTGTATTGAGAT CTTCAATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAAACTATCTAAATAAGCTATCAGAAGCTGATGAAAAGCATGTCCCTGTGGACTTGGCGTT TTGTATTGCCAAAGATGTCGCATGCGCTTTGTTGGAACTGCATTCGAAGCACATAATACACCGTGACATAAAAAGTGAAAACATTCTTTTTGATTTGGAT AAGAGAGACGATGGAATTCCCACTGTTAAGCTCTGTGATTTCGATAGTGCGGTGCCACTAAGATCACCTTTGCATGCATGCTGCATTGCTCATGTGGGAA CACCTCCTCCATGTGTATGTGTTGGAACACCTCGGTGGATGGCTCCAGAGGTCATGCAGACGATGCATGAAAAACACACTTATGGATTGGAAGCTGATAT TTGGTCATTTGGATGTTTACTTTTGGAGATGCTCACTCTACAAATTCCATATTCTGGAGTCTCTGATTCAGATGTCCATGACAGTCTGCAGATTGGTAAA CGACCAAAATTAACTGATGAGCTAGAAGCATTGTGTTCAGTCAATGAACCGACAATGATTCAATCTGTTAAAGTGGAAGAAACAGATGCTGAGGTAGATA TGTTGAAATTCCTTGTTAATTTGTTTGGTAAGTGTGTCGAAGAAGATCCAGCAGAACGTCCTACAGCTCACGAAATCCATGAAATGCTGCTTAAATACAA CCCCCCTTCAAGAACAAGATGTTAAGAAGATTTAGGTGGAGGGTTATTGGGGTGGTCCTGTCTGGGCCAAATTTTATAATAACCCCTTCGTGTTATATTA TTAGAAAATAAAATGTATCCATTCTTTTCAGTTTTTATTTGTAGCGTTAGGACTTGCTCATGAATAATTAATTATTGTTATCAGGTTTAGTGTGTTCAGT GAGTTATCTCCTGTACATTTTCAAGGGGTTAAAATTTGAATCCAGCCGGCTCTAATGTAATCTGTTTGAGATCTGTATTTGTAATGTACAATCATTTTGT AAGTGGATATGATTAATTTATTCATACCATTCAGCTCTATGCTGTTGTTAGTATAGCATGTTGTCTGCTCAAACTTGGTACTTCTGTGTTTTTTTGTTGC TTTTTTGAAGAATTTTAGAGAACAATGCTTTCTTTATGAACATATTTTTTTGTAAAGCATTATAGTATTGTTTCGTTTGGTTGTAATAAGACATGGTTAT TGTTGTTGAAGTAATTTTAATGAACAGGATAGATGTAAG
• Tissue: pods
• Gene name: LI_gene_166166;
• Additional information: details;

Expression of Ll_transcript_331968

FPKM

• PAB: 3.1
• PNAB: 7
• PS1: 7.6
• PS2: 8.1
• PS3: 7.8
• PW1: 7.9
• PW2: 7.2
• PW3: 6.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_331968

• Blastp: Mitogen-activated protein kinase kinase kinase A from Dictyostelium with 30.58% of identity
• Blastx: Mitogen-activated protein kinase kinase kinase A from Dictyostelium with 30.58% of identity
• Eggnog: mitogen-activated protein kinase kinase kinase(ENOG410XQGS)
• Kegg: Link to kegg annotations (DDB_G0283265)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427520.1)
• Pfam: Leucine Rich repeat (PF13516.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;