Ll_transcript_331985

• Id Trinity: TRINITY_DN49052_c4_g1_i5
• Name Transcript: Ll_transcript_331985
• Sequence: GCAGCAGCAGCAGCAGCAGCAGCATGAGTCAGATGAAATGGAACCCCAATCTGAAGAAATTAGTGAGAAATCCGAAGAAAAGAAAGCCAAAATAGATGGC CTGGAATCGAAAATTGAGGAAGAAGGCGTGACTCTGGACGTAACAGGGAAGAGCTTGGAGTTCCCGTCATCCTCATCATCATCACCGGAAAGTAAGAAAG ATTCGGCGGTGGAGAGTTTGTATCTATACAAGAATGTTTATAGTTTGATACCGAAGTCGGTGGGTGAACACGTTCGTTTGAAAACCCTCAAGTTCTTCGG GAACGAGATTAATTTATTTGCACCAGGGTTTGGGGACCTCAATGGCCTGGAATGCTTGCACATGAAGATTTCTTCTCCCGCTATTGGTGGCTTACCATTA CATAAGATGAAGGCTTTGAAAGAGCTTCAGCTCTCCAAAACCCCTCCAAGGCCTTCTGCTTTTCCTATTTTGACTCACATTGCTACTCTCAAACGCTTGA CCAAGCTTTCTATTTGTCACTTTTCTATCAGATTTCTTCCTCCGGAAATTGGATGCTTAAAGAATCTGGAGCATCTGGATCTTTCATTCAACAAGATTAA GAGGTTGCCTGAAGAGGTGACTTTCTTGAGTGGATTGATATCCATGAAAGTTGCCAACAATAAATTGGTGGAACTACCATCAGCAATGGCATCTTTGTCC ATGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCGTTGGGATCCATTGAACTTTGCTCAATGCATAGACTGCGGAATTTAAATCTTCAGTACA ATAAGCTGCTAAGCGTCTTTCAAATACCTCCATGGATATGCTGTAACATGGAAGGGAATGATGGAGGTGGATGCAACGATGATTGTAGCAGTTATGTTGA AATGGATGTCTATGAAAATAGTTCACAGGAAAATGATATTCATGGCCCTCATAACACCTCTTCAACTTTATTAACTAGCTCCTCATCTAGCAGTAGATGT TTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAACGCCAGTATTACTTACAGCAGAGAGCTCGACAAGCATGCTTGAACAGCAGCAGGAAGTGGAAAGGTG TAGATCATGATCAGTTGCTGAGCAAAAAGGTTCACAGAATTTCTGAACCAGAAAATGTAGACAGTCTTGCTTCTGAAAGTTGTAGAGAAACTGTATCAGA CAAAGGAAACCTGGATGAAAATAAAAAAAGAATATTTTCTGAAGAACCAGTGAACAACAATTTAATTGATGTTGTCAATGATGATGAAGTTATTATTAAA AAGCCGTTTTGTCCAGAAAGTTGCTGCACCGCGGAAAGTAAAAATGAAAAAGATACATCCTTATGCTCCGTAGAGAATATGCCAACTGAACTGGATGAAG CATCCTGTTCAGAAGTTCAGAAGTGTATTTCTAAATCAAAGAGGCCCTCAGATCAAGATATTGATAATCCCAAACCGTGCAAATCTAGGAAACCGATTGA CAATAGCTCATTGTTGTCTAGCCAGTACAGTAAGATCTCATTCTGTGGCATTGAAGACCATCTATCCGATGGCTTCTATGATGCAGGACGTGATCGGCCC TTTATGCCACTTGAGAATTATGAGCATAAACAGTGTTTTGATTCTCGTGAAGTTATTCTGTTGGACAGAAAAAAGGATGAAGAGTTGGATGCTGTGTTGC TCTCTGCTCGGGCATTGGTCTATAATTTGAAGAACCAGGCTGTGGTTTATAACTTGCAGGCAGTATCACTGCTTGCGCTCTTTGTATCAGATCATTTTGG TGGCAGTGATAGAGGTGCTATTATCGAAAGGACAAGGAAAGCTGTTTCTGGTTCAAACTATAATAAGCCTTTTGTCTGCACATGCTCAGCTGGGAGCAGC ACTGATATAAGTGCTTCAGACAAACCAGTTGTAAACACCACAGAAGATATTACTCTTCCCATGATTTCTGAAAAATCTCTTCATTCTATAAAGAAAAGGC GAAGTTCAATTGTAGTTCCAATTGGGTCTGTGCAATTTGGTGTATGTAGACATAGAGCTTTGCTTTTGAAGTACTTATGTGATCACATGGAGCCACCAGT ACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAACATCATTTTGATTAAGAGAGATGGTATATGGGTTCGAATGCTAGTTGAT GCATGTCGGCCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTACATACCTCTTACTCGAACAGAAATCTCACCTTCATGTAGAGAAA CTCCTGGACCTGATCATTCCTTTCCATCTCTCTCTGCTTGTAATGAGCTTGAGAAAAAAACTTCTACTACTTTAGTCCAGTGCAAACTTGGATCAGTTGA GGCTGCAGCCAAGGTGCGCACTTTGGAAGTGCAGGCGAGTTCATCTGAAAAAATTAAAAACTTTGAATATAATTGCTTGGGAGAAGTTAGAATTCTAGGT GCTTTAAAACATCCCTGCATAGTGGAAATGTACGGACACCAAATATCATGCCAATGGACTCTCTCATCTGATGGTAATCCTGAGCATTGTGTATTGAGAT CTTCAATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAGTAAGATTTTATATTTCATTTTTTGTTATTATTAACATATTTTGATTGTTTTATTAAGT TTGTACTTCATATTCTCTCAGAACTATCTAAATAAGCTATCAGAAGCTGATGAAAAGCATGTCCCTGTGGACTTGGCGTTTTGTATTGCCAAAGATGTCG CATGCGCTTTGTTGGAACTGCATTCGAAGCACATAATACACCGTGACATAAAAAGTGAAAACATTCTTTTTGATTTGGATAAGAGAGACGATGGAATTCC CACTGTTAAGCTCTGTGATTTCGATAGTGCGGTGCCACTAAGATCACCTTTGCATGCATGCTGCATTGCTCATGTGGGAACACCTCCTCCATGTGTATGT GTTGGAACACCTCGGTGGATGGCTCCAGAGGTCATGCAGACGATGCATGAAAAACACACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTAC TTTTGGAGATGCTCACTCTACAAATTCCATATTCTGGAGTCTCTGATTCAGATGTCCATGACAGTCTGCAGATTGGTAAACGACCAAAATTAACTGATGA GCTAGAAGCATTGTGTTCAGTCAATGAACCGACAATGATTCAATCTGTTAAAGTGGAAGAAACAGATGCTGAGGTAGATATGTTGAAATTCCTTGTTAAT TTGTTTGGTAAGTGTGTCGAAGAAGATCCAGCAGAACGTCCTACAGCTCACGAAATCCATGAAATGCTGCTTAAATACAACCCCCCTTCAAGAACAAGAT GTTAAGAAGATTTAGGTGGAGGGTTATTGGGGTGGTCCTGTCTGGGCCAAATTTTATAATAACCCCTTCGTGTTATATTATTAGAAAATAAAATGTATCC ATTCTTTTCAGTTTTTATTTGTAGCGTTAGGACTTGCTCATGAATAATTAATTATTGTTATCAGGTTTAGTGTGTTCAGTGAGTTATCTCCTGTACATTT TCAAGGGGTTAAAATTTGAATCCAGCCGGCTCTAATGTAATCTGTTTGAGATCTGTATTTGTAATGTACAATCATTTTGTAAGTGGATATGATTAATTTA TTCATACCATTCAGCTCTATGCTGTTGTTAGTATAGCATGTTGTCTGCTCAAACTTGGTACTTCTGTGTTTTTTTGTTGCTTTTTTGAAGAATTTTAGAG AACAATGCTTTCTTTATGAACATATTTTTTTGTAAAGCATTATAGTATTGTTTCGTTTGGTTGTAATAAGACATGGTTATTGTTGTTGAAGTAATTTTAA TGAACAGGATAGATGTAAG
• Tissue: pods
• Gene name: LI_gene_166166;
• Additional information: details;

Expression of Ll_transcript_331985

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_331985

• Blastp: Leucine-rich repeat protein SHOC-2 from Gallus with 30.93% of identity
• Blastx: Mitogen-activated protein kinase kinase kinase 1 from Arabidopsis with 33.16% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (423894)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427520.1)
• Pfam: Leucine Rich Repeat (PF00560.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;