| Id Trinity | TRINITY_DN49053_c6_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_330602 |
| Sequence | TTTCTCTATAAATACCATTTCCCTTTCCCTCTCAATTTTCTTATCACAACAATCTCAACTCATTCCATTCAACCTATGCAACACACACTAATCTTATCTT CAAAACAAATATCTTATATACCCATCTCTACTTCACAAATTATCAGGTCACAACCCTCAATATCCTACTTTTTCAGAGTATTCTCAAGTGGTGGAAACTC TCTTCAATGGAGATTCAAGAGAATCATCAACAAGAAGCATCATGGGAAACAGATAGCATGGGAAGTAGAAGCACAAGAGTAGCATTCAGTGGTCCAATGA GTGGTCCATTAGTTAGCAACAAAACAAGAAACAGTAGCAAGAAGAGTGCAAGGTTCAAGGAGGAGGAAGAGTTGGTGGAAATAACATTGGATGTTCATGA TGATAGTGTTTCTGTGCAAAACATTAGAGGTGGTGATTCTGAGACAGCTTTGTTAGCAACAAGGTTGGAGAAAAGGCCTTCTTTTGGGGTTAGGTTAAGG CAAGTGTCTCAAGAACTTAAACGCATGACTTCTTCAAAGAAGTTTGATAGGGTTGATAGGGCTAAATCTGGTGCAGCTCGTGCACTTAAGGGTCTTAAGT TCATGGCTGTCAAAAATGTTGGAGCTGAAGGTTGGGTTCAAGTTGAGAACAGGTTTGATGAGTTGGCAGTTGATGACAAACTTCCAAAAACACGTTTTGG ACAGTGCATAGGAATGCAAGAGTCCAGAGACTTTGCTGGTGAGTTATTTGATGCATTAGCACGTCGTCGAGGAATAACATCAGCATCCATAACAAAACAA CAATTGCGTGAATTTTGGGAACAAATTACTGATCAAAGCTTCGATTCAAGGCTTCAAACTTTCTTTGACATGGTTGACAAGAATGCTGATGGAAGAATTA CTGGAGAAGAAGTTCAAGAGATTATTGCATTAAGTGCTACTGCTAATAAGTTATCAAAAATACAAGAACGAGCAGAGGAATATGCAGCCCTTATCATGGA GGAGTTGGACCCTGACAACCTTGGCTTCATTGAGTTATACAACTTGGAAATGCTTCTTCTACAAGCACCAGCACAATCAACTCACATAACCACTGATAGT AGAGTTCTGAGCCAAATGTTGAGCCAAAAACTAGTCCCAACCAAAGAGTACAACCCTATCAAACGAGGGTTCAAGGCACTGGCCTACTTTGTGGAGGACA ATTGGAAAAGAATTTGGGTTATAGCACTTTGGCTTTCAATTTGCATTGCACTTTTCACTTGGAAGTTCATACAGTACAAGCATCGTGCAGTGTTTCATGT TATGGGTTATTGTGTCACAACAGCAAAGGGTGCTGCTGAAACCCTAAAGTTCAACATGGCCTTAATCCTCTTACCTGTGTGTAGAAACACCATCACTTGG CTCAGGAGCAAGACCAAGTTAGGAATGGCTCTTCCTTTTGATGACAACATCAACTTTCACAAGGTGATAGCTTTTGGCATTGCAATAGGGGTAGGGTTGC ATGCTATTTCACATTTAACCTGCGACTTTCCAAGGTTACTGCATGCAACAGACTCAGAATATGAACCTATGAAGCCATTTTTTGGTGATGAGAGACCCAA CAATTATTGGTGGTTCGTGAAGGGAACAGAAGGTTGGACAGGTATAGTCATAGTGGTGCTTATGGCTATAGCATTCACTTTGGCTCAACCATGGTTCCGT AGAAACAGATTAAACCTTCCAAAAGCTCTAAAGAAACTCACTGGTTTCAATGCTTTTTGGTATTCTCACCATCTCTTTGTCATTGTCTATGCCCTTTTTA TCGTTCATGGATACTACTTATACCTCTCCAAGAAATGGTACAAGAAAACGGTACGTAAATAAATATATATATATATACACACACACACATGCTATATATA TTATAACCTATAGTTTTTTTTCTTCATTTTTTCTTCTGCTTCAAATTTTGTTCTTGTTTTCTAAACTTTGTTTCACAAAATTTATAATGCAGACATGGAT GTATGTTGCAATTCCTGTGATCATATATGCTTGTGAGAGATTACTTCGTGTGTTTAGGTCTGGCTACAAAAGTGTCAAGATTTTGAAGGTTGCAGTGTAC CCAGGAAATGTATTGGCCTTGCATGTGTCTAAACCACAAGGATTTAAATACTCTAGTGGACAATATATTTTTGTTAATTGTTCAGATGTCTCACCATTTC AATGGCATCCTTTCTCTATTACATCAGCTCCTGGAGATGATTATGTAAGTGTTCACATTAGGACTTTGGGTGATTGGACATCACAATTGAAGGCTGTTTT TGCTAAGGCATGCCAGCCATCAAGTGTTGACCAAAGTGGTCTTCTAAGAGCTGATATGTTACAAGGCAACAATATACCAAGGATGCCAAAACTGATGATT GATGGTCCTTATGGAGCTCCAGCACAAGACTACAAAAACTATGAAGTAATCCTTTTGGTGGGTCTAGGAATTGGAGCTACACCTTTGATTAGCATACTAA AAGATGTTCTAAACAACATTAAACAACAAAAGGACATAGAAGAAGGTGATGTTGAAAGTGGAGTTACAAACAACAAGCGAAAACCTTTTGCAACTAATCG AGCTTATTTTTATTGGGTTACTCGCGAACAAGGTTCATTTGAATGGTTCAAGGGTGTAATGGATGAGGTTGCTGAGTATGATAAGGATAAAGTAATTGAA CTTCATAATTATTGTACAAGTGTGTATGAAGAAGGTGATGCAAGATCTGCATTGATTACAATGCTTCAATCTTTACACCATGCAAAAAATGGTGTAGATA TTGTTTCAGGCACAAGGGTCAAGACACATTTTGCTAAACCAAATTGGCGTAGTGTCTTTAAACATGCAGCAGTTAAACACCCTGGAAAAACAATTGGTGT GTTTTATTGTGGGGCACCAGGACTAGTTGGAGAACTGAAAAGGCTTTCTCTAGACTTTTCTAGAAAAACCAACACTAGATTTGATTTTCATAAAGAGAAC TTTTAGAATATTCTTTTCTCATGGTTCTACAATTATTTTATCCAACTACAATTATATATAGTTAGAGGAAATTTAATCAAGTTATGTATAATTTATAAGT ACAGCATATATAGTTAGTGGAATTTTATCAAGTTATATATAGTTGTTGCTTTTCCTTTCAGAGGTAGCTGTATTTGAGTAACTAAGTTGTATGCATGTAT TAAAAATGTATTCACTTTGTTGTAAAGCGAAGTCATTATTTTGATTAAGATGTTCATATCATATTGATTATAGTAACATAAGAGTTCAAATTTTGTAAAG CCGAATAAACAGACTTATAGAAAAAAGGCGCTATAAATATTTCGAAAAAAACTAGTCTTACTGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166176; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330602
| Blastp | Respiratory burst oxidase homolog protein B from Solanum with 75.05% of identity |
|---|---|
| Blastx | Respiratory burst oxidase homolog protein B from Solanum with 74.62% of identity |
| Eggnog | NADPH Oxidase(ENOG410XNZY) |
| Kegg | Link to kegg annotations (102603596) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440572.1) |
| Pfam | Respiratory burst NADPH oxidase (PF08414.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |