| Id Trinity | TRINITY_DN49053_c6_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_330608 |
| Sequence | ATTTTTTTAAAAGAAGTTTAAATTGGAATGTTGGTTCACTTCCCAAATTACTTATATTTAATACGCCATATCAAAATTTCTGGAGTTCCGATTCTTCATT TAATTAAGACTGTGAATCATAATCGTTTTGAAACATAGTGAGATACTAGCCGCATTGACATTAGGATATGCCATAAGAAATCTTACTTGTAGTTTCCAAA AAGACAAATAAGGTACTCAAATTTTCTAGAGTGTGACTTGGTTCATGAATTTCATTATAAAAAGCTAAGCCGCACTTTATGCAAGTTGCATGTGAAAATG TCATAATTTACAATTGTTGACTCTATAATATAATGCATTATTTCTACGAAAGGTAGCTAAGGAACAAAAATGAATTATTTGTATACATGTTACACATGGG GAAAACGAATCCACACTTAGCTCATATGTAAAGGTTGGGTGAGATTTGATTCCAAGACTTTGTAATAATCTCACATGAGAAATTATTTTCCTATATAGAA ATAGTTATATTAACCAATGTTGGAAAATTTCCTCATTATTCTTTAGGATCTGACTCATTTTATTCTTTATTCAAACTTAACAAAAATTATAGGATTAGAA GTTGATAATCTAAGGTGGAGCTAGAGTTTAACCACAAAACAACATATTAAGTAACAAACAATATGAAGTGAAAAAAAAAATTGGTCTAGTAGTGTAAGAT GTTACTGGGTCTCCAAGTATCGTGCTAACTTAAAGGTGAAAAGTTCGATTCCTGATAGAATATTTGTTGGGAGAGACAATCCCATATCGTAAAAGATTTC CTTATCTTTATGGAATACAAAAGGGAAGAAAAGGAATGAATGAAGGAGGGCATTCCTTTATGGAAAAAAAGAGAGAAGAAATAATCAAACCTTGCTTGGC CTCTCTTTATGAAAAAAAGGAGTCAACGATTGATGGGTTGACCTTGAAAAATGTGTGTAACTAGAAGCAATTAAACATTATACATATATTATATTAAGTC AAAATATGAAAACAATTATGAAATTGAAAATGTCAATATGATTGAATCTTGATTAGGTCTCTAAGTTACTTTGTACCTAACATAATATACTTACCTTATG CCAGGGTTGACAAGAATGCTGATGGAAGAATTACTGGAGAAGAAGTTCAAGAGATTATTGCATTAAGTGCTACTGCTAATAAGTTATCAAAAATACAAGA ACGAGCAGAGGAATATGCAGCCCTTATCATGGAGGAGTTGGACCCTGACAACCTTGGCTTCATTGAGTTATACAACTTGGAAATGCTTCTTCTACAAGCA CCAGCACAATCAACTCACATAACCACTGATAGTAGAGTTCTGAGCCAAATGTTGAGCCAAAAACTAGTCCCAACCAAAGAGTACAACCCTATCAAACGAG GGTTCAAGGCACTGGCCTACTTTGTGGAGGACAATTGGAAAAGAATTTGGGTTATAGCACTTTGGCTTTCAATTTGCATTGCACTTTTCACTTGGAAGTT CATACAGTACAAGCATCGTGCAGTGTTTCATGTTATGGGTTATTGTGTCACAACAGCAAAGGGTGCTGCTGAAACCCTAAAGTTCAACATGGCCTTAATC CTCTTACCTGTGTGTAGAAACACCATCACTTGGCTCAGGAGCAAGACCAAGTTAGGAATGGCTCTTCCTTTTGATGACAACATCAACTTTCACAAGGTGA TAGCTTTTGGCATTGCAATAGGGGTAGGGTTGCATGCTATTTCACATTTAACCTGCGACTTTCCAAGGTTACTGCATGCAACAGACTCAGAATATGAACC TATGAAGCCATTTTTTGGTGATGAGAGACCCAACAATTATTGGTGGTTCGTGAAGGGAACAGAAGGTTGGACAGGTATAGTCATAGTGGTGCTTATGGCT ATAGCATTCACTTTGGCTCAACCATGGTTCCGTAGAAACAGATTAAACCTTCCAAAAGCTCTAAAGAAACTCACTGGTTTCAATGCTTTTTGGTATTCTC ACCATCTCTTTGTCATTGTCTATGCCCTTTTTATCGTTCATGGATACTACTTATACCTCTCCAAGAAATGGTACAAGAAAACGACATGGATGTATGTTGC AATTCCTGTGATCATATATGCTTGTGAGAGATTACTTCGTGTGTTTAGGTCTGGCTACAAAAGTGTCAAGATTTTGAAGGTTGCAGTGTACCCAGGAAAT GTATTGGCCTTGCATGTGTCTAAACCACAAGGATTTAAATACTCTAGTGGACAATATATTTTTGTTAATTGTTCAGATGTCTCACCATTTCAATGGTAAG TCAAAATACTCATGATTATTATTATATCGTAAAATATATATATTGCCCGTGTAAAGATTTATACGCAATCAGTATATCATTCACTCATTCATCTGCATTT GTATTGCTGAAATCTAATAATCAACGATAATCAAATATGAATGGTAGATGATAAACTGACAGTATAAAAATCGGTTAATCGTATGTGACTGAGTGAATGT TATTGTGTGGTATGTATAGGCATCCTTTCTCTATTACATCAGCTCCTGGAGATGATTATGTAAGTGTTCACATTAGGACTTTGGGTGATTGGACATCACA ATTGAAGGCTGTTTTTGCTAAGGCATGCCAGCCATCAAGTGTTGACCAAAGTGGTCTTCTAAGAGCTGATATGTTACAAGGCAACAATATACCAAGGATG CCAAAACTGATGATTGATGGTCCTTATGGAGCTCCAGCACAAGACTACAAAAACTATGAAGTAATCCTTTTGGTGGGTCTAGGAATTGGAGCTACACCTT TGATTAGCATACTAAAAGATGTTCTAAACAACATTAAACAACAAAAGGACATAGAAGAAGGTGATGTTGAAAGTGGAGTTACAAACAACAAGCGAAAACC TTTTGCAACTAATCGAGCTTATTTTTATTGGGTTACTCGCGAACAAGGTTCATTTGAATGGTTCAAGGGTGTAATGGATGAGGTTGCTGAGTATGATAAG GATAAAGTAATTGAACTTCATAATTATTGTACAAGTGTGTATGAAGAAGGTGATGCAAGATCTGCATTGATTACAATGCTTCAATCTTTACACCATGCAA AAAATGGTGTAGATATTGTTTCAGGCACAAGGGTCAAGACACATTTTGCTAAACCAAATTGGCGTAGTGTCTTTAAACATGCAGCAGTTAAACACCCTGG AAAAACAATTGGTAAGTCTTCATTTTCCTCTTAATTTAATTAATTGTTACGTGTTGTTGGTCTAGTGTTATAAGGCTTTATTGGATCAAAGCAGTGTTTT AAATTGCGGTTGCGGTAACGGTTGTGGTTACTGCGATTATGGTCATTGCGGCCGTTGCGGTGTGAATTACGTTGTGAGTAAAAACATATTTTTGAGATCG ATGCATCCTGATGCAGCCCGATGCGGTCCAAATGCGGTTGTGTTGCGGTCGCGTTACTGTGATTCGGTATCACATGCAATTGCAGTGTGATGCGGTTGCG ACGGTGTTCGCAACCGCAATATTGCGGTGACATCACCTGATGCGGTTCGCAATTTAATACACTAAATCACCCCGAAAGAAATTCCTAAGCTCATTTTTGT TTTTGTATTTTTATTTTTCAGGTGTGTTTTATTGTGGGGCACCAGGACTAGTTGGAGAACTGAAAAGGCTTTCTCTAGACTTTTCTAGAAAAACCAACAC TAGATTTGATTTTCATAAAGAGAACTTTTAGAATATTCTTTTCTCATGGTTCTACAATTATTTTATCCAACTACAATTATATATAGTTAGAGGAAATTTA ATCAAGTTATGTATAATTTATAAGTACAGCATATATAGTTAGTGGAATTTTATCAAGTTATATATAGTTGTTGCTTTTCCTTTCAGAGGTAGCTGTATTT GAGTAACTAAGTTGTATGCATGTATTAAAAATGTATTCACTTTGTTGTAAAGCGAAGTCATTATTTTGATTAAGATGTTCATATCATATTGATTATAGTA ACATAAGAGTTCAAATTTTGTAAAGCCGAATAAACAGACTTATAGAAAAAAGGCGCTATAAATATTTCGAAAAAAACTAGTCTTACTGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166176; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330608
| Blastp | Respiratory burst oxidase homolog protein B from Solanum with 83.43% of identity |
|---|---|
| Blastx | Respiratory burst oxidase homolog protein B from Solanum with 82.87% of identity |
| Eggnog | NADPH Oxidase(ENOG410XNZY) |
| Kegg | Link to kegg annotations (102603596) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440572.1) |
| Pfam | Ferric reductase like transmembrane component (PF01794.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |