Ll_transcript_329427

• Id Trinity: TRINITY_DN49061_c0_g3_i2
• Name Transcript: Ll_transcript_329427
• Sequence: CTTGATGTAAGGCATGGTTTCCTTGTATTCATGGTCTTGTAAGAGAAGCTACAAGAATGGATTTGTGTGGCATGATCTCTTTGAAGATGATCTAATTCTA CCTGCCCGTGGAAGTGAGTATGTCCTCAAAGGTTCTGAGCTAATTGACGAATCAAATTCAGATCATTTCATCCCCATCAGCAATATTGAAGTACAAAGTC TGAAGCAGTCGCCAGAGCCGGTTTCTAGTAGGAGTCATGATGAAGCTTCCTCCTCTTCTAGCTTGAATGGGAAAGAGACAAGAAACTCTCTAAAAGATGA GCTTTCCCCAGGAAAACACACTGGTTCCTCTGATGTTTCTCCGAAATCTAGTGCCGGAAAGAGTGGTCCTCTAATCTTGCATTCAACGGAGTACAAAATC TGCAACAAGACTGAAGTGTTGGCAGATGCTTCTACTCAGACAGAAGAAAATGATTATAGACCTGATATCCAGAAAACTTGCACTAGGGGTGTATCAACAG ATGATGGATCGGCAGAACCTGAATGCAATCGAATATGTGGAGCTGAAGAGCCACAAGTGAAAGATGGTTCAGAAATATGCAGGGATTGTGCTTTGTAGAG TAAAACTATGGATGTTTTCTTCTCATGAAAAAGGGATCTGAGATGTGTTATTATGTGCTACATAATTTCACAAACATTATCTTACATATGAAATCTTTAT GTCTGCATTTTTATCTTTTATAAAAGTTGTATGTAAAACACAACTTTTTTATATGAACCCTCGTCTCAAAATATGAAAGCCTTTCAAAGATGTTTCAAAA TCTC
• Tissue: pods
• Gene name: LI_gene_166244;
• Additional information: details;

Expression of Ll_transcript_329427

FPKM

• PAB: 7.3
• PNAB: 6
• PS1: 7.7
• PS2: 13.9
• PS3: 14.4
• PW1: 12.3
• PW2: 9.2
• PW3: 15.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_329427

• Blastp: Protein UPSTREAM OF FLC from Arabidopsis with 59.62% of identity
• Blastx: Protein UPSTREAM OF FLC from Arabidopsis with 59.62% of identity
• Eggnog: function DUF966 domain containing protein, expressed(ENOG410YC81)
• Kegg: Link to kegg annotations (AT5G10150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436292.1)
• Pfam: Domain of unknown function (DUF966) (PF06136.12)
• Rfam: -
• GO: -