| Id Trinity | TRINITY_DN49061_c0_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_329442 |
| Sequence | GGTAGAGGCATGGCTTCCTTGTATTCATGGTCTTGTAAGAGGTGAGCAAGTTATGTTTTACTATGTCCTCTTGTCAAATTTGTATGTTGAGAAACACAGA AGAGAGTGAAAGAAAAGAGAATAGAAACAAGAATAATACCGAGGTAGCGGTTGGCACGCTATTTTGCCCTCTAAGGTTTCATCCATTCTGTTCTGTTTTT ATAATACATAGAAGTTAGAACATATACATAAGCAATATGTTGTGTTCCATATTGTTCTATCGTGTCTACCAAACGCTACACGAGACTTGGTAATGAACAA TGGTTAGCACAATTGATAAGGGCGAACCGTAGGAACTTAGTTTCCCGGATTTGAATTGTGTCACATTGTTGTTGCTGGATTATATGTAAGTTATACTGTA AGCAATTTTTCAGCCTAGGGTGCCCCGTCCCTAGTAGTCACCCTTGTCCTTCAATTTTTATGTACTGAGAAAAAAAATGAGATCTGATAGGGTGCCCCTT GTTTCTATTTTGAATTTTAGGAAAGTTAATGCAGCGTAAACTATAACAAATCAAGGTTTAAGATTCAAATTGTTTCACACTATGGTCGAGTTGTTTTTAT TTTGTCTTATCGTTTATAATGTAATTCAGAAGCTACAAGAATGGATTTGTGTGGCATGATCTCTGTGAAGATGATGTAATTCTACCTGCCCATGGAAGTG AGTATGTCCTCAAAGGTTCCGAGCTATTCGACGAATCAAATTCAGATCGCTTCAGCCCTATTAGCAACATCAAAATACAAAGCCTGAAGCAGTTGCCGGA GCCGGTTTCATTTAGGAGCCATGATGAAGCTTCCTCCTCTTCTAGCCAGAATGGGAAAGAGACAAGAAACTCTCAAGAAGGCGAGCTTTCCCCGGAAAAA CACATTGGTTCCTCTAATGTTTCTCCCAAGTCTATTGCTGGAAAGAGTGGTCCTCTAAGCTTGCCACTGACGGAGTACAAAATCTACAAGACTGAAGGGT CGGCAGATGCTTCTACTCAGACAGAAGAAAATGTTAATAGACCTGATATCCAGAAAACTTGTATCAGGGGTGTATCAACAGATGATGGATCATCGGAACC TGAATGCAACGAAATATGTGAAGTTGAGGAGCCACAAGTGAAAGATAATTCAGAAATATGTAGGGATGTTGTTTCTCCTCTTCCCTCAAATTCTAGCCCG TCTTCTTCGGGAGGGAAAACTGAAACTTTGGAGTCCTTGATTAGAGCCGATGTGAATAAAATGAACAGCTTTAGGATCCTGGAAGATGACGACATTCGAA TGCCAACCGGTACAAGGCTGAAGGCCTCAAATCTGTTGATGCAATTGATCTCATGTGGCTCAATATCTGTGAAAAATCATAGTTTTGGCCTTATTCCTTC CTACAAGGCTAAGTTTTCTGATTCAAAATTCCCTTCCCCATTGTTCACCACTTCTATTACGCTGCGGGATTTTGATTGCCTAGCAGAGAATCCAAATGCG ATGGGGCTAAGATCGGAAGACAGAGAGTATTTTAGTGGGAGCATAGTGGAGTCTAAAATACTGAAGGAAGAAGCAGATGGACATAATGTTCGGAAACGAT CTTCCTACAATGCGGAGAGGACATGTCAAGAACTGAGATCAAAAGATCGGGAGGAATCATCGTCTGGACATTCAAAGTGCATTCTTCGGTGTGTTAAGGC TTCATTGACAAAGCAGCCACAAAATGAATCCGCGAGATCTCCTGTGTCTGATAGACCAAGAAACTCTATGGATAGGATTGAAAGCTTAAGAGCATCGCCG GTACCATCCAATGGTAGCAGCCGAAGAATCACCGAACCTTCATCAGGGAAAAGGCATTCTAAGAGGGTAGATTCATTTAGAGAAGAGGAGAAGGTGATCA AAATCGAAGAAAGTTAAGTGTTGAGTTTATCATGTACCTAGTTTCTACTGAAATTCTTAAAAAATTTGAAGTATGTCCCGAATCAAGAAAAATTTCTTGT ACCGAACCATTCGATGTGTATCACCTCAACTATGCAGGTCACCATTATCTTACTTTAGCAACATTTTTTAATATTATAACCGATATTAAGAATTTTTTAT CACTTCATGTGCACCTGAGAATTTCTTGTAGATACAATATTTACTCACTGATTAACAAGTTTGATTTTAATTCATCAGGCTTTCTTCCGGAGCACGGGTT ATAATCCAATCCAAACCATCTCGCGACACTGGATCCGAGAGCTTTTAAAGTTTATGCTATAGAGGTTAGGCAACTATCAGAATTACTGATTTTCACCTTT ATTTTGAATATAACATGATGCTATCTATCTATGTAGATTCACATGACATTTACATAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166244; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_329442
| Blastp | Protein UPSTREAM OF FLC from Arabidopsis with 29.87% of identity |
|---|---|
| Blastx | Protein UPSTREAM OF FLC from Arabidopsis with 66.67% of identity |
| Eggnog | function DUF966 domain containing protein, expressed(ENOG410YC81) |
| Kegg | Link to kegg annotations (AT5G10150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447809.1) |
| Pfam | Domain of unknown function (DUF966) (PF06136.12) |
| Rfam | - |
| GO | - |