Ll_transcript_331868

• Id Trinity: TRINITY_DN49073_c1_g1_i1
• Name Transcript: Ll_transcript_331868
• Sequence: GCGAATTGGGCACAGTTTTGCGAACGGGCATGGGAATTAGTCATGTGTCAGGAGAAATTGGTATAAGAAGCCATAGTAGGTAGATTTACGGCATGCTGAG TTCATCCCTGGGGTACAACACATCCAGATAGTGTTATTTTCTGCATTTTTAATGTTTTAAGGTGTTGTGTTCCGCACACACCTCACACATTCCTAATTTA CTATTCCTGATTGCAACTGCTGTTGAAGACGAAAGATTGGAAAGAAGAGGAAGACAATCACAGTAAGACAAGAAGAGTATTATGATGCCTAATGCCATCT AATCCATATAGTTGACTCCACCTAGTATGACTAAGGCTTAGATGTTGTAAATCTTTGTCTCCTCTCAAGGAAGAGTAAGAGTTATAATCAAGGTAAGAAA AGAATGTTGGATCTTGCCGGAGATAAATTCGATGAACTTAATGGGGTTGGTGTTGCGATGCTTGAGGTTGCTACTCTTTCTCTTGATGAACCAGGCATGG AGGTTGTCCTTTTCGGGGACAGCAGATGTGCACCTGTCCTTTTCTGTGACGATGGCGAAGGAAATGATGAGATTGAAGGAGTTGGAGTTTGATTTTCATA GTCTAAGTTTAGGCATGCTTTTGTGATATTGAACCATATTAATATCTTAGTTTCTTCTTGTGATGTATTGTAATATACTCAGATGTTTTATTGTCATTTT GGACATCTTAACTTCCTTTTATGTTATGCATGATACTCCCACCTAGTGGGGTCTAGGAATGGTAGATGTACACAACCTCACCCTCGCAAGTGAAGATGTT TCCAGAATTTGTTTCACAAGGAAAACAATCTTACCATTGTACCGAGACTCGCAGGAGATCGCTACATCCAAATGCTTCATCAGGTATGGGTGTTGCTGAT CACAGCCAAAATACGTTCATGGACTTGAAGCTAAAGAAGGTCTATCGCTATGTGATCTTTAAGATTGATGAAAATAAAAGGGAGGTTGTGGTTGAGAAAA CCGGTACTCCATCTGAGAGCTATGATGATTTTGCTGCATCATTGCCTGCGAACGATTGCAGATATGCTGTCTTCGACTTTGATTTTGTCACCTCTGAGAA CTGTCAAAAGAGTAAAATCTTTTTCATTGCATGGTTAGTTTATCCCACCTCTCTCTCAAATGCATATATATATTTTTGTGTTAAAAGAAAAGCTATATTA CTTTGTCTTTTAAGAGCATTGTTACTCCAACTAGACAAAGTAGATAGTGATGTTTCTAAAATGTGGCACATGATATGCAATATCCCGTGCAACAAAGGAA ATCACGCAGCACATATGATTTACACAGTTCCATATTTTTGCAGTTCTCTAACTCACCATGTAATGATGCTAGAATGCTTTAGTCTTCAATGGCATTCTTT GCATGTTCTCTATTCATGACACCATATGTTTATCTTTTCATTATTTTGTGCTAAATTTCCTCTCTCTTTTGTTTAGATGCAACTTCTTTTGCATTGATTG AGTTGCCTATTCTTGTGAACCCAGCATTTTGTAGTATTTCAATATTTTTCTGGCTTCTTGTAAATTACGACATTCCAATCTGTTTGCTGCTCTCAGAAAT CAATTTGATCAGGGGGGATATTTTAAGGGCAAACAAAGCATTTGTTGCAGATAAGATTGTACTTGCTACAGGTGCTTATGTTTATATGGAATAATCTGAT GTAATTAACACAACACAATAAATTCAACCATACAAGACTACAAGAGTAAGTGTCACGAATACCTTAAGTGCGGCATAATTTTCTTTCCGACTTGTTGGGG CATTTTATTTGTTTAGGTGTAACTTTACAATTGGTATTTAGATAATTTAAGTAATCTCTGTATATTTCTGTCCTCTTTTTGTTGAAATCTTATCTAAGAC AAAAGCAATTTGAGGAGATTAAGCTTTTGGCACTTAGCTTTTTTTATAGCAAGTGCACTCTCTGGTCACAGAATCTCCATTAAGATACCGTCTACTTATT GAGATTGGAATCATAATTTTAGTGTCTTCAAATAAGATGATGGTCTCATGAAGGGAAAGGTAGTCTTGTTCATCGTAAATCTTTACCATAACTAAACTCG CAAGTCATGCCGTGATATAATCTATCTTGTTCTTCACAAAAATAAGTACAAATATGGATTCTTCGGTTCGCTATTGGTTTTGTTCCCTATTTCTTGTATC ATTGCACATGATTTGTTCTCAAGCCTTGAGGCTTGTTCAGAACCTAATTGAGGGCATTAGCTATAAACTTTAATTTGAACCTTTGAAGGAGTTAGATTCC TACAGAACCCATTTTATGTTTTTTAAGGTTCTGTTTATTTCTCGATGGAATGCTATTGTGATGAACACGGCTACTTTGACCATTAATTAAGCCATATCGT ATGTTTAGGTTTATCTACGCTACCACTTTGATATTTCATTTGAAGTTAGACTTCATCCTCCTTTTCCTGTGATTTGAGTTCTGCATTTTTTCACTCCTGT GCCTTATGTTAGGACAAAGTTCTTCATTCATAACAGCTTTCACCTATGTGCTTCCGAGTTCATTTCTGCCATTGAGATAACATTCTAAGTTATTCATTGC ATGATATTGTTTAGGTCTCCTTCCACATCGCGCATC
• Tissue: pods
• Gene name: LI_gene_166354;
• Additional information: details;

Expression of Ll_transcript_331868

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_331868

• Blastp: Actin-depolymerizing factor 6 from Arabidopsis with 67.29% of identity
• Blastx: Actin-depolymerizing factor 6 from Arabidopsis with 77.78% of identity
• Eggnog: actin-depolymerizing factor(ENOG41122P5)
• Kegg: Link to kegg annotations (AT2G31200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462131.1)
• Pfam: Cofilin/tropomyosin-type actin-binding protein (PF00241.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;