| Id Trinity | TRINITY_DN49073_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_331869 |
| Sequence | AGACTCGCAGGAGATCGCTACATGTAATCTAGTTTTCAAGAATATGTTTTACCCTATATGTACCCGTATTGGTGCGACACAGGAGACCAGTGTAGTTTCT CCTGAAACTAACAATATCCTTATTAACATAACTTTAAGCAATTTAAAAATGACTTTCCCGTTTAAAAAATTTTATCTCGAGAGTTTCTCTCAATAACAAG CATTAGAGATTTTTTTGACCGAGTTACACTTGGTTTGCAGCCAAATGCTTCATCAGGCATGGGTGTTGCCGATGACAGCCAAACTACATTCATGGACTTG AAGCTAAAGAAGGTTTATCGCTATGTGATCTTTAAGATCGATGAAAGTAAAAGGGAGGTTGTCGTTGAGAAGACCGGTGTTCCAGCTGAGAGCTATGATG ATTTTGCTGCATCTTTGCCTCAGAACGATTGCAGATATGCTGTCTTCGACTTTGATTTTGTCACCTCTGAGAACTGTCAAAAGAGTAAAATCTTTTTCAT TGCATGGTTAGTTTATCCCACCTCTCTCTCAAATGCATATATATATTTTTGTGTTAAAAGAAAAGCTATATTACTTTGTCTTTTAAGAGCATTGTTACTC CAACTAGACAAAGTAGATAGTGATGTTTCTAAAATGTGGCACATGATATGCAATATCCCGTGCAACAAAGGAAATCACGCAGCACATATGATTTACACAG TTCCATATTTTTGCAGTTCTCTAACTCACCATGTAATGATGCTAGAATGCTTTAGTCTTCAATGGCATTCTTTGCATGTTCTCTATTCATGACACCATAT GTTTATCTTTTCATTATTTTGTGCTAAATTTCCTCTCTCTTTTGTTTAGATGCAACTTCTTTTGCATTGATTGAGTTGCCTATTCTTGTGAACCCAGCAT TTTGTAGTATTTCAATATTTTTCTGGCTTCTTGTAAATTACGACATTCCAATCTGTTTGCTGCTCTCAGAAATCAATTTGATCAGGGGGGATATTTTAAG GGCAAACAAAGCATTTGTTGCAGATAAGATTGTACTTGCTACAGGTGCTTATGTTTATATGGAATAATCTGATGTAATTAACACAACACAATAAATTCAA CCATACAAGACTACAAGAGTAAGTGTCACGAATACCTTAAGTGCGGCATAATTTTCTTTCCGACTTGTTGGGGCATTTTATTTGTTTAGGTGTAACTTTA CAATTGGTATTTAGATAATTTAAGTAATCTCTGTATATTTCTGTCCTCTTTTTGTTGAAATCTTATCTAAGACAAAAGCAATTTGAGGAGATTAAGCTTT TGGCACTTAGCTTTTTTATAGCAAGTGCACTCTCTGGTCACAGAATCTCCATTAAGATACCGTCTACTTATTGAGATTGGAATCATAATTTTAGTGTCTT CAAATAAGATGATGGTCTCATGAAGGGAAAGGTAGTCTTGTTCATCGTAAATCTTTACCATAACTAAACTCGCAAGTCATGCCGTGATATAATCTATCTT GTTCTTCACAAAAATAAGTACAAATATGGATTCTTCGGTTCGCTATTGGTTTTGTTCCCTATTTCTTGTATCATTGCACATGATTTGTTCTCAAGCCTTG AGGCTTGTTCAGAACCTAATTGAGGGCATTAGCTATAAACTTTAATTTGAACCTTTGAAGGAGTTAGATTCCTACAGAACCCATTTTATGTTTTTTAAGG TTCTGTTTATTTCTCGATGGAATGCTATTGTGATGAACACGGCTACTTTGACCATTAATTAAGCCATATCGTATGTTTAGGTTTATCTACGCTACCACTT TGATATTTCATTTGAAGTTAGACTTCATCCTCCTTTTCCTGTGATTTGAGTTCTGCATTTTTTCACTCCTGTGCCTTATGTTAGGACAAAGTTCTTCATT CATAACAGCTTTCACCTATGTGCTTCCGAGTTCATTTCTGCCATTGAGATAACATTCTAAGTTATTCATTGCATGATATTGTTTAGGTCTCCTTCCACAT CGCGCATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_166354; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_331869
| Blastp | Actin-depolymerizing factor 6 from Arabidopsis with 69% of identity |
|---|---|
| Blastx | Actin-depolymerizing factor 6 from Arabidopsis with 69.16% of identity |
| Eggnog | actin-depolymerizing factor(ENOG41122P5) |
| Kegg | Link to kegg annotations (AT2G31200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426548.1) |
| Pfam | Cofilin/tropomyosin-type actin-binding protein (PF00241.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |