| Id Trinity | TRINITY_DN49074_c1_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_332381 |
| Sequence | AAAAGATCCTTAAAAAATTATAATTGCAGAGAACATAGTAACTCGTCCACATAGGAAAACGCACACCATACAACAGGGGCTAGCATGGCATGTCCAATAT TTGATGTTTCAAGTGAACACAAACAAAACTAACTGAACATACCGAAGAAGGACCCTGTTGTTAGACCAATTGCTGAATTAGGCCCAAAAGCTTTGCAAGA ACTTCTACCTGAGATTCCTCTGTGGGTGAAAACACCTGATTATGAACGAGTTGATTGGTTGAACAAAATTTTGCTGGATATGTGGCCTTTCTTAGACAAG GCAATTTGTCGGATGGTTAGAATCTTAGTTAAACCAACATTTGCTGAATACATTGGGAAATATCAGATTAAAGGAATTGAGTTTGATAAGTTGAGCCTTG GTACTCTCCCTCCTACTATTTGTGGTATTAAAGTCTTACATACACATGAAAAGGAATTGGTCATGGAACAAGTGATCAAATGGGCTGGTAATCCAAACAT AGTGTTGGATTTGCATGTATCATCTTTGAAGATCTCATTTCAGTTGATAGACTTACAAGTATTTGCGACATCACGGATAACTTTAAGACCTTTAGTGCCT ACATTTCCATGTTTTGCAAAGATTGTGGTATCCTTGATGGAGAAGCCTCATGTGGATTTCGGGATGAAAATATCTGGAGGTGACATCATGGCTATACCTG GTCTTTACACATTTGTTCAGGTGCTGCTCCAGTAATCTTAATTTTATTCCTACTGATAATGGTTTCGATTTTGTTAAACTTCCTACCAAATTGAACAAAT GGCTCCCAACTTACACTCTACTATGTCATTTGTGCTTGGATTAGATTTTTGTAGCAGTGGACTTTATAGTGAATTCAAACTTCATATTTGTATGCTATTT TTATGTCATGAAATTGAGTTAATCACTAGAAATAGAGGACAGTTTTATGAATTTTGGCACCTTTAGATTGTGCATAATCTGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166358; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_332381
| Blastp | Synaptotagmin-3 from Arabidopsis with 64.63% of identity |
|---|---|
| Blastx | Synaptotagmin-1 from Arabidopsis with 60.21% of identity |
| Eggnog | Domain-Containing protein(COG5038) |
| Kegg | Link to kegg annotations (AT5G04220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429073.1) |
| Pfam | Synaptotagmin-like mitochondrial-lipid-binding domain (PF17047.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |