Ll_transcript_332368

• Id Trinity: TRINITY_DN49074_c1_g1_i2
• Name Transcript: Ll_transcript_332368
• Sequence: AAACAGCACACAATAAACCAGGAATAGGACAATGTTTGAGTTGTAAAGAAACGAAAGCACTCAAAACAGAAGAACCAATTTCAAAATGACCGAGCCAATG TTTCTGTTTCAGTTTCTCTGTTTTGCAACTTTTGTTTCTTCTACTCTATAGTTACAACTATATAGATTTTCTCACCGGCTTCTCTCACTTTCCTGCAAAA CTGTTCAACAGAACCATTTTTCTTTATTCACTTCATTGGCCCTTTCATATCATTTTTCTCACTAATTTGTGTTAAGCGTGATGGGGTTGCTCAGCAGTTT ATTGGGGATTATTGGTTTTGTTATTGGAATCCCTCTTGGCCTATTGGTTGGCTTCTTTATATTTGTTTATGAAGATACCAAACAAGTCAAGGACCCTGTT GTTAGGCCAATTAGTGAATTAGGCCCAAAAGCTTTGGAAGAACTTCTACCTGAGATTCCTCTGTGGGTGAAGACACCTGATTATGAACGAGTTGATTGGT TAAACAAGTTTTTGCTGGATATGTGGCCTTTCTTAGACAAGGCAATTTGTGGAATGATTAGACTCACTGCAAAACCAATATTTGCTGAATACATTGGCAA GTATCATATTAAAGGAATTGAGTTCGATAAGTTAAGCCTCGGAACTCTTCCTCCTACTCTCTGTGGTATTAAAGTCTTAGAAACAAATGAAAAGGAATTG GTCATGGAACAGGTGATCAAATGGGCTGGCAATCCAAACATAGTGTTGAATTTGCATGTTTCTTCTTTGAAGATCTCAGTTCAGGTTAGATAAGCCATAA GCCTTGAGGTACAATCCTAAATGGTGAATGTTATTTTTAGTTCCGTCAAGATTGACGTGTTCCTTTTGGGAATTCATTTTGGTTCTTCTCAGTTGGTAGA CTTACAAGTATTTGTGACATTGCGGACAATTTTAAGACCTTTAGTGCCTACAATACCCTGTTTTGCAAAGATTGTGGTATCTTTGATGGAGAAGCCTCAC GTGGATTTCGGGATGAAGATATCCGGAGGAGACATCATGGCTATACCTGGTCTTTATGGATTTGTTCAGGAAGCAATAAAAAAACAAGTTGCAAGTCTCT ATCTCTGGCCTCAAACCTTGGAAATCCCTATCCTTGATGAATCAACGGTGGCCATAAAGAAGCCCGTGGGAATATTACATGTGAATGTAGTTCGGGCACA TAAGCTTTTGAAGAAGGACTTGTTGGGAACTTCTGATCCTTACGTCAAACTAACTCTAACCGGAGACAAACTTGCAGCAAAGAAAACCACTATCAAGATG AGGAACTTGAACCCGGAGTGGAACGAGAAGTTCAAGCTTGTTGTGAAGGACCCTAATTCTCAAGTTCTCCAATTACAAGTCTATGACTGGGACAAGGTTG GTGCGCATGACAGGCTGGGGATGCAATTAGTCCCTCTTAAGCTTCTTAAACCCTACGAGAATAAAGAATTTACGCTCGATTTACTTAAGGACACTAATAT CAATGAAGTTCCGATAAAGAAGAATAGAGGGCAGATCGTGGTGGACTTGACTTTTGTTCCTTTCAAAGAAGATAGCATGAAGTTTGGTGGACATTCGAGA ACATATAGCAGAAAGGAAAGTGGAAAGGATGTGGTATCCGATGATGAGGTCCAAGACGGAGCAGGTTTACTTTCACTTGTGATACAAGAAGCTGAGGAGG TTGAGGGGGAACATCACAACAACCCATATGCAGTGCTTACCTTTAGAGGTGAAAAGAAAAAGACTAAGATGATGTGGAAAACTCGTCACCCACGTTGGAA TGAAGAATTCCAATTCATGCTTGAGGAGCCTCCTCTACATGAAAAAATACACATTCAGGTTTTGAGCAAGAGGAAAAGGTTTAGTTTTCTCTCAAAGGAA TCATTGGGGTATGTGGAGATTAATCTGAATGATGTGGTGCACAATGGTCGCATAAATGATAAATATCATCTTATAGATTCAAAGAATGGAGTGATACAAG TTGAGATAAGATGGACAACAGCTTGAGAAATCAAACCAATGTCTCAACTCTAATCATACATTTTTTGGATTCCTATCAGAGTATAAAAATTACAATATGT TGTTACCTTTTGCCATACCTCGGTAACAATAGAACTCCCCGGTAGTTGGAGGCTCCCCGATCGTGAGTCTGGTCCAACATCCTGTACATAGTACATCGTT TTATTTTTTGTAGACAATCATATTAGAGATATAAAACATACTATATAATGTAACTTGATCTCTTAGCACACAACACTCAAACCAATCACCTTTTAGTTAC AAATTAATGTTTGAAGAATCTTATATGCAAACTTTTATGGAAAGAAAATATGTGTATTATCATTGTTGTATTATTATTTTTTTGAAAAGAAATCTTAACA ATAATTAAATATGAATCATGTAGTAGTAGTGTATCAAATTCATACACTGAGGTTATAACTTAACTCAAAATCATTGTTTGAGACAAATCCACAATACTAA ATGAAAATTTTATCTTTAAATGAACCTAATATCTTATTATAAAAGTTGTTTATACTTTTAATAACTTTAGGTAACTCAATTAAAATTCACAACTCTATTT ATATTTTA
• Tissue: pods
• Gene name: LI_gene_166358;
• Additional information: details;

Expression of Ll_transcript_332368

FPKM

• PAB: 0.6
• PNAB: 0.1
• PS1: 0
• PS2: 0.4
• PS3: 0.1
• PW1: 0.1
• PW2: 0.1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332368

• Blastp: Synaptotagmin-3 from Arabidopsis with 65.26% of identity
• Blastx: Synaptotagmin-3 from Arabidopsis with 59.57% of identity
• Eggnog: Domain-Containing protein(COG5038)
• Kegg: Link to kegg annotations (AT5G04220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451085.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;