Ll_transcript_332369

• Id Trinity: TRINITY_DN49074_c1_g1_i3
• Name Transcript: Ll_transcript_332369
• Sequence: AAACAGCACACAATAAACCAGGAATAGGACAATGTTTGAGTTGTAAAGAAACGAAAGCACTCAAAACAGAAGAACCAATTTCAAAATGACCGAGCCAATG TTTCTGTTTCAGTTTCTCTGTTTTGCAACTTTTGTTTCTTCTACTCTATAGTTACAACTATATAGATTTTCTCACCGGCTTCTCTCACTTTCCTGCAAAA CTGTTCAACAGAACCATTTTTCTTTATTCACTTCATTGGCCCTTTCATATCATTTTTCTCACTAATTTGTGTTAAGCGTGATGGGGTTGCTCAGCAGTTT ATTGGGGATTATTGGTTTTGTTATTGGAATCCCTCTTGGCCTATTGGTTGGCTTCTTTATATTTGTTTATGAAGATACCAAACAAGTCAAGGACCCTGTT GTTAGGCCAATTAGTGAATTAGGCCCAAAAGCTTTGGAAGAACTTCTACCTGAGATTCCTCTGTGGGTGAAGACACCTGATTATGAACGAGTTGATTGGT TAAACAAGTTTTTGCTGGATATGTGGCCTTTCTTAGACAAGGCAATTTGTGGAATGATTAGACTCACTGCAAAACCAATATTTGCTGAATACATTGGCAA GTATCATATTAAAGGAATTGAGTTCGATAAGTTAAGCCTCGGAACTCTTCCTCCTACTCTCTGTGGTATTAAAGTCTTAGAAACAAATGAAAAGGAATTG GTCATGGAACAGGTGATCAAATGGGCTGGCAATCCAAACATAGTGTTGAATTTGCATGTTTCTTCTTTGAAGATCTCAGTTCAGTTGGTAGACTTACAAG TATTTGTGACATTGCGGACAATTTTAAGACCTTTAGTGCCTACAATACCCTGTTTTGCAAAGATTGTGGTATCTTTGATGGAGAAGCCTCACGTGGATTT CGGGATGAAGATATCCGGAGGAGACATCATGGCTATACCTGGTCTTTATGGATTTGTTCAGGTGCTGCCCTTGTTATTTCTTTTCTTTTCCTGCTGATGG TGGTTGCTATTTTGTTAAACTGTCTATACCAATTTGAGTAAATTGCTGCCAACTTACACTGTTTTGTGTTTTGATTTGCTCACTTTTTTTATTTGGATTA GAACTTTTGTAGTAGTAAACTTTCTAGTAAATTAAACTTCATAGTTTTATTTTTACTTTTATGTCATGGACTTGGGTTTATCACTACAAATTGCGGTTTG TTCTATGAAATGCATAATCTATTTTTCGTATGCACATTCAATCTCCGACTCTATAACGGACAGAATGACTATTTTAGTATACTTGAAGACTAACTACTTC AGTTAGTTGCTTACAGGAAGCAATAAAAAAACAAGTTGCAAGTCTCTATCTCTGGCCTCAAACCTTGGAAATCCCTATCCTTGATGAATCAACGGTGGCC ATAAAGAAGCCCGTGGGAATATTACATGTGAATGTAGTTCGGGCACATAAGCTTTTGAAGAAGGACTTGTTGGGAACTTCTGATCCTTACGTCAAACTAA CTCTAACCGGAGACAAACTTGCAGCAAAGAAAACCACTATCAAGATGAGGAACTTGAACCCGGAGTGGAACGAGAAGTTCAAGCTTGTTGTGAAGGACCC TAATTCTCAAGTTCTCCAATTACAAGTCTATGACTGGGACAAGGTTGGTGCGCATGACAGGCTGGGGATGCAATTAGTCCCTCTTAAGCTTCTTAAACCC TACGAGAATAAAGAATTTACGCTCGATTTACTTAAGGACACTAATATCAATGAAGTTCCGATAAAGAAGAATAGAGGGCAGATCGTGGTGGACTTGACTT TTGTTCCTTTCAAAGAAGATAGCATGAAGTTTGGTGGACATTCGAGAACATATAGCAGAAAGGAAAGTGGAAAGGATGTGGTATCCGATGATGAGGTCCA AGACGGAGCAGGTTTACTTTCACTTGTGATACAAGAAGCTGAGGAGGTTGAGGGGGAACATCACAACAACCCATATGCAGTGCTTACCTTTAGAGGTGAA AAGAAAAAGACTAAGATGATGTGGAAAACTCGTCACCCACGTTGGAATGAAGAATTCCAATTCATGCTTGAGGAGCCTCCTCTACATGAAAAAATACACA TTCAGGTTTTGAGCAAGAGGAAAAGGTTTAGTTTTCTCTCAAAGGAATCATTGGGGTATGTGGAGATTAATCTGAATGATGTGGTGCACAATGGTCGCAT AAATGATAAATATCATCTTATAGATTCAAAGAATGGAGTGATACAAGTTGAGATAAGATGGACAACAGCTTGAGAAATCAAACCAATGTCTCAACTCTAA TCATACATTTTTTGGATTCCTATCAGAGTATAAAAATTACAATATGTTGTTACCTTTTGCCATACCTCGGTAACAATAGAACTCCCCGGTAGTTGGAGGC TCCCCGATCGTGAGTCTGGTCCAACATCCTGTACATAGTACATCGTTTTATTTTTTGTAGACAATCATATTAGAGATATAAAACATACTATATAATGTAA CTTGATCTCTTAGCACACAACACTCAAACCAATCACCTTTTAGTTACAAATTAATGTTTGAAGAATCTTATATGCAAACTTTTATGGAAAGAAAATATGT GTATTATCATTGTTGTATTATTATTTTTTTGAAAAGAAATCTTAACAATAATTAAATATGAATCATGTAGTAGTAGTGTATCAAATTCATACACTGAGGT TATAACTTAACTCAAAATCATTGTTTGAGACAAATCCACAATACTAAATGAAAATTTTATCTTTAAATGAACCTAATATCTTATTATAAAAGTTGTTTAT ACTTTTAATAACTTTAGGTAACTCAATTAAAATTCACAACTCTATTTATATTTTA
• Tissue: pods
• Gene name: LI_gene_166358;
• Additional information: details;

Expression of Ll_transcript_332369

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.1
• PS2: 0
• PS3: 0.3
• PW1: 0.4
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332369

• Blastp: Synaptotagmin-3 from Arabidopsis with 61.73% of identity
• Blastx: Synaptotagmin-3 from Arabidopsis with 64.6% of identity
• Eggnog: Domain-Containing protein(COG5038)
• Kegg: Link to kegg annotations (AT5G04220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451085.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;