Id Trinity | TRINITY_DN49074_c1_g1_i4 |
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Name Transcript | Ll_transcript_332370 |
Sequence | AAACAGCACACAATAAACCAGGAATAGGACAATGTTTGAGTTGTAAAGAAACGAAAGCACTCAAAACAGAAGAACCAATTTCAAAATGACCGAGCCAATG TTTCTGTTTCAGTTTCTCTGTTTTGCAACTTTTGTTTCTTCTACTCTATAGTTACAACTATATAGATTTTCTCACCGGCTTCTCTCACTTTCCTGCAAAA CTGTTCAACAGAACCATTTTTCTTTATTCACTTCATTGGCCCTTTCATATCATTTTTCTCACTAATTTGTGTTAAGCGTGATGGGGTTGCTCAGCAGTTT ATTGGGGATTATTGGTTTTGTTATTGGAATCCCTCTTGGCCTATTGGTTGGCTTCTTTATATTTGTTTATGAAGATACCAAACAAGTCAAGGACCCTGTT GTTAGGCCAATTAGTGAATTAGGCCCAAAAGCTTTGGAAGAACTTCTACCTGAGATTCCTCTGTGGGTGAAGACACCTGATTATGAACGAGTTGATTGGT TAAACAAGTTTTTGCTGGATATGTGGCCTTTCTTAGACAAGGCAATTTGTGGAATGATTAGACTCACTGCAAAACCAATATTTGCTGAATACATTGGCAA GTATCATATTAAAGGAATTGAGTTCGATAAGTTAAGCCTCGGAACTCTTCCTCCTACTCTCTGTGGTATTAAAGTCTTAGAAACAAATGAAAAGGAATTG GTCATGGAACAGGTGATCAAATGGGCTGGCAATCCAAACATAGTGTTGAATTTGCATGTTTCTTCTTTGAAGATCTCAGTTCAGGTTAGATAAGCCATAA GCCTTGAGGTACAATCCTAAATGGTGAATGTTATTTTTAGTTCCGTCAAGATTGACGTGTTCCTTTTGGGAATTCATTTTGGTTCTTCTCAGTTGGTAGA CTTACAAGTATTTGTGACATTGCGGACAATTTTAAGACCTTTAGTGCCTACAATACCCTGTTTTGCAAAGATTGTGGTATCTTTGATGGAGAAGGTAAAG AAAAAACTGTAATAACTTCATTCATGCTTAGTTTCATTTCGTCGTTTCTAATATAAGAAGCCATCAAGCCAGAATAATTC BLAST |
Tissue | pods |
Gene name | LI_gene_166358; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_332370
Blastp | Synaptotagmin-3 from Arabidopsis with 60.36% of identity |
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Blastx | Synaptotagmin-1 from Arabidopsis with 47.45% of identity |
Eggnog | Domain-Containing protein(COG5038) |
Kegg | Link to kegg annotations (AT5G04220) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451085.1) |
Pfam | Synaptotagmin-like mitochondrial-lipid-binding domain (PF17047.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |