Ll_transcript_329624

• Id Trinity: TRINITY_DN49075_c0_g2_i15
• Name Transcript: Ll_transcript_329624
• Sequence: ACATATATCCCTTTTAACATAGATCAGTCCTTAATCGAAACCAGATTACCAAACCTACCCATCCAATTTTTGATTGATTCCTTAACTATTCATCTTTATG AAGACGGAGCACAACTAAATTGATGCATGGTTGATGGGGCTGAATGGTACTTAATAAAAACACATGCTTTCAATTCTAAGAATGTGGTCAACATCCTTAT TATCCAGAACATCATCATCATCTATTTACAAATTCATGGATTCTTCTTCAAATGGAGGAAGATCTCAGTCTCAGAGGCTTCTTACTTTGGCACAGCATCT TCGCCTCTACAAGCCGCCACCTTTCCCCACTGAAGAAGATGATGATGAAGAAAGTAGCAGTAATAGTGGTGGCAAGGTTGTTTCTCAAGTGGGTTTTCCA GAATCAGTTACCCCAATTGCTCAAAGATTCAGACCCAAAAAAGCTGCTGTTTTGATCTGTTTATTTGAAGGAGATGCTGGTGATCTTAGAGTCATTCTCA CTAAGCGCTCTTCCAATCTATCTACTCATTCAGGTGAAGTGGCCTTGCCAGGTGGGAAGGAAGAGGAGGGGGATAAAGATGATGCGGACACTGCAAAAAG AGAGGCAAATGAGGAAATTGGGTTGGACCCAGATGTTGTTACTGTTCTTGAACCATTCTTGTCTAAGGTGTGTGTTCTATTTCTATTTAACACTACTTCA TAGGCTGCATTAATTAGTATAACTTTGATGGACCTTTTTATTGAGTTGCTTGGTTTATAGCACAATTAAGTGTTCTCTGATTCTGTGAAATTTGCATATC TGTTAAAATTATTTCCATGATGGTTGGTTCATGAAATAGGGTTTGCCTAATTCAGTGTTCTCTTGGTTTAGAATTGCATGAGTTCTGTATTGAGCAGTAG GGTTTTGCAAAGATTTTAAGATGTAGAGGCCTTTTAGCAAAGGTTCAGTATGGATAAGCAAAATTTATATTGTAACTGCATAATAAATCTGGTTTGGAAC AGAAACTAGCCACTCCTATTTTTTACATTTTTACCCGTTATTCAAATGTGGATCTTAATTACATTTCACCTTGTAAGAGTTATAATAGGTTGGGAAAGGT GAAAAAACACTTAGTTTATTGATTGCAACCATTCCATCTTGTAGTAGATATTAATTGTTTTAACATTTTTTCCACCCCTCCGATGTATACATCTTCCATT TACCCTGTGGGAATTCTCAGTGTTTTTCTGTCAATGTCTTTGCTTTTTTTATTTTCCATATTCAATAACGTCGAGGAGTTCACTGGGGCTACAATTAAGA AAGGAATGGTTGAAAACAACAAATCCATGGCTGATGCTAAAACTGATGAAGAAAAGGGAAAAATTGTGATTTTCATCTTCTGGACATGTTGCATGATTTT TCAGAAGCCTAAAAAACAGAATGCTACAACTGGGTTGTGGACATGTAATAACATTTTGACAATGACAAAGCCATTGTACGCTAAAGTGCCTTCTTTTATT GGAGATAAGAAAATCAACCTTTCTTGGAAAGAAGTGGCAAAAACTGCACCATCTACTACACCAACTGCTGGGCAAATTCTGACCTAGCCAAGACATGAGC CATGACTGAGGTAACCGGGCATCATGATCGTACCACTGTTTGAGTCATGGTCAGGCCAAGCCAAAATCTGATCGAGGCAAGAGATGACACTTGACCGAGG CAGCTGAGCATCGTGACCGTTCCACTGCTTGAGTCATGCCTTGGCCAAAATCTGTTTCCTCACCGAGACATGCTAGGATAACCGAGGGAAGCTTGCTGGT TGGCGCATCAGATGCAACAGTTTTTGGCGCATCAGGTGCAACAGTTTTTGGCGCACCAGGCCTGCACACCTTGGTGTGATGGCCTGGTCATTCCTGGTGC GTCAAGGCCAGGAATGTTGGACCAGTTTTTCCTAGGTTGAGTTTTGTGATACTTCTAGAAGAATGATTTTGTAGTAGAGCAATTTTATTTGACATGTGTT AAATAGAGAAATTAGTTATAGTTAGTTAGTATAGTTGTGATAGTTTTAGTTAGGAAGTTGGTTTCTTAAGTTTCAAGTAAACTCTTATTACCTTTAATTC CTAGTTATCATTAACTATGACCAAAAGTTATTTCAAATGGTGATAGGGAAGAGTGGATTATGACTTCTGGTAACTGAGAAGCTGTTGTGTGCTGATGCTC CGGTGTATCACTCGTGCTGTTATAATCCGACCTTGTTGAACTGTCAGTAACATCACCCTCTGCTTCTACTTCATCATTAGTGGTGCCATTACCTTGTGCA TGATTTTGAGGTGTTTGACTATATTTTAGCGAATAGATGGTAGGAAGTACAAGACAGATAGTAGAAATGCCTCCAGAAATCGCGTATAGAACCCATAAAT TTCCAAGCTTCAAAGTTTCTGCATTGGTGGAGATCTTGCTGTTGGTGCACTCGCTTGAGGGATTCAACCATTTATCTTCTAGTTTCTTAATCTCTCCCTG TTCTAAGAGCTGCAATATAGCTTTAGAAACGTCTTTGGCAATTGGGGAGCCTTTCTGGAACATCTGCATCATGGGATTGTCAAGAAACATAGTACAATTT GTGAAAGATACAAATACATTTTAATACAAAAGCTCAAATCTTTGAGAGCATTTCCTTTGCAGCCAGAGCATAAAGTTAAGTGGTAGAAAATGGAAGTTCA AGATAGATCATTTTTAAAAGAGTTCTGTTGTCACTTACAAATCCCAGTCCTCCAAATCTGGTGGTTGGTACAGAGCCAGAGTATCGCCCGCAGTATGTAT TGACGTATGCTTTGTCATAACGGAGTTCGAGAAAAGCAGCTGCTATTGAGTTATTTTTGAATGCAGTGGGATACTTCGATTCGCTCTTAATGCTTATGAT GTTCTCTGGCTTGAACCCTTCCACATTCGCTAGGTATGTCCTAACAAATGAATCTCCATCACAACCAATTTTCGCATTGTTCTTCTTCAACCACTCAATG CTTGTGACATTTGGCTTCAGTTTTTGAACTGTGAGCATTGAAGAAAGACTGGCTGTATAGCTGGAGTTAAGAATCAAAACTAGAAAGAGCCATGCTCCCA TCACTAAACGAGTTAAGTTGCCATACATTTTCTCCCCTGCAACATGAAACCATTGACATCATTTGAGTGTGATTCACATTTGCAATACATTGGTTTTTAT AACAGTATTTTATAGATATTTTTAATTCTGAATACCTAAGGTGGCTATTTTCCATATATATGCTTGATAAATATTGTTAATTGAAGTATGAGATTGAATT ATTTATACTCACTGTGTGCAAAGAATAGAGAGGAGAATGTAAACCAAA
• Tissue: pods
• Gene name: LI_gene_166362;
• Additional information: details;

Expression of Ll_transcript_329624

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.4
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_329624

• Blastp: Nudix hydrolase 15, mitochondrial from Arabidopsis with 60.12% of identity
• Blastx: Nudix hydrolase 15, mitochondrial from Arabidopsis with 67.15% of identity
• Eggnog: Nudix hydrolase(COG0494)
• Kegg: Link to kegg annotations (AT1G28960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447196.1)
• Pfam: NUDIX domain (PF00293.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;