Ll_transcript_330875

• Id Trinity: TRINITY_DN49092_c2_g3_i1
• Name Transcript: Ll_transcript_330875
• Sequence: AAACAAACCAAAGTTGTAGAAAGTCCTTATGATTCGGGAGTAGGTATATAGCAATGTTTGTCCCTCCCTGATTTGTTGCTGTAATCTATGAGATATTGTT TTTGTATTAGGACAACATCGTACTATATTAAGATTCCTTTCCATTAACACTAACAACTATAAATATTATGTTTGAGTCACTATCACCCTTCTTCATTTAA CCCTTCTTTCTCATTTTGTTTGAATCACCCATTTCAATCCCTTCACTAACACACGTTTGTTATACTGGGTAAAGCATAAGTTGATGGAGCAAATGGAACA TGATGAAGTGCCTATCTTGGAAGGAAGGTCCAACCAGGAAATTGAGATACCCATAATCTCTGAGAGGCCTGAAGTTGTTCATAAAACAATGGAATCATAT TGCAATTCTGTTTGTGCTTTTTCCAAACAAGAAAACAGTGCTGCGGCATCAGAAGAGTCAGCAAAATCAGCAAAGAAGCTTTGTGGACTCATAATTTTCT ATGCTATTGTAATGCTTGTGGAAATTGTGGGTGGTATAAAAGCTAACAGTTTAGCAGTAATCAGTGATGCAGCACACTTGCTTTCTGATATTGCCGGATT CTCAATCTCTCTCTTTGCAGTTTGGGCTTCAGGCTGGGAGGCAACACTAGATCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGTGCATTTTTGTCT TTGCAGTTAATTTGGTTTATATCTGGTTTTTTGATTTATGAAGCAGTTGGTAGAATTCTCCATCGAAATGCCAAGGTGAATGGCGTGCTCATGTTTGGAA TTGCAGCATTTGGGTTTTTTATTAATTTTATCATGGTTGCATGGCTTGGTCATGATCATCACCATCATGGCTTCGGAGTCTCAGATCATAATCATCACCA TCATCATAGCCATGGAGACTCGGATAACGATCATGATCATCATCATGGTCATGGAGACGCTGTTAACGACCATGGTCATCATCATGGCCATGGAGACGCC GTTAACGACCATGGTCATCATCATGGCCACGGAGACTCAGATAACGATCATGGTCATCATCATGGCAGCAGCCACTCAAATCATGATCATGAGAAGGGGG AACCACCTAAAATAAATGATGCGGAGAAACTTGACCTGCTTTCAAGTAATCATAGTAATAGTAATGCCTTGAACATAAATCTGCAAGGTGCTTATTTACA TGTCATGGTTGATATGATCCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTAAACCAGAGTGGTTAGTGGTTGATCTTATGTGCACTCTT ATATTTTCTGTCATATCTTTGAGTACTACTGTGCCTATGCTTAGGAATATTTATGGCATTTTGATGGAGAGAACACCAAGTGAGATAAATATCATTGATC TGGAAAAAGGGCTCAGAAGTATCAAAGGAGTGCAAGTTATTCATGACTTGCATGTTTGGTCCATAACAGCTGGAAAAAATGTTCTGTCTTGCCATGTAGT AGCTGAGTCTGGGATCAGTTCCATTGACTTACTTGCCAAGATTAAGGATTACTGCAAAAATACACATAAAATACAACATGTAACTATACAAATTGAGTAA GATTAGATTGAATCTGACTCCTGTCCGGAGAGATAATTGGTTGATTATGCTCTTGGTTTTAAGGAAAGAAACGTCGTATTATTATAGTTAAGGGGTAAAA ATGACATATCACATTGGTTTTATCATTTGCTTTTGATGTACTTCATGGGGAGGATCCTTACCTGATTAGATTTCCCCTCACACTATTTTACTCCTTATTA GTTATTAGAGGTGTATCTTATGTGTTTTATTTTCCCCATTCTTGCATGAAACAAATGTATACATGAGAACTAGCATATCAGTCTGATATGTAAGGGAGGC ATTAAAAATTGAACATAGCACAATGTTGTAGAAATAAAGTTCTATTTTAAATTAATGAAATTTTTGTGGTTGTT
• Tissue: pods
• Gene name: LI_gene_166489;
• Additional information: details;

Expression of Ll_transcript_330875

FPKM

• PAB: 1.3
• PNAB: 1.1
• PS1: 0.7
• PS2: 0
• PS3: 0
• PW1: 0.8
• PW2: 0.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330875

• Blastp: Metal tolerance protein 1 from Oryza sativa with 46.1% of identity
• Blastx: Metal tolerance protein B from Arabidopsis with 53.62% of identity
• Eggnog: cation diffusion facilitator family transporter(COG1230)
• Kegg: Link to kegg annotations (4337694)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413971.1)
• Pfam: Cation efflux family (PF01545.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;