| Id Trinity | TRINITY_DN49092_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_330876 |
| Sequence | TGACACACATATACATGTATGATTTTGAATTGCACTTGGCCTCCTTCAATTTGAATTTGTCAAAACTTTTTCAGAATTCACCAACCATGGCCTTTTCCCG TATCTGCAATGTAGCTTTGATTTAAATGCTCTTTATGTTGTTGATTTTAGCAATTTAATACTGAAAATGTGATGACTTTTGTAAATGAATAGTTTGTTAT ACTGGGTAAAGCATAAGTTGATGGAGCAAATGGAACATGATGAAGTGCCTATCTTGGAAGGAAGGTCCAACCAGGAAATTGAGATACCCATAATCTCTGA GAGGCCTGAAGTTGTTCATAAAACAATGGAATCATATTGCAATTCTGTTTGTGCTTTTTCCAAACAAGAAAACAGTGCTGCGGCATCAGAAGAGTCAGCA AAATCAGCAAAGAAGCTTTGTGGACTCATAATTTTCTATGCTATTGTAATGCTTGTGGAAATTGTGGGTGGTATAAAAGCTAACAGTTTAGCAGTAATCA GTGATGCAGCACACTTGCTTTCTGATATTGCCGGATTCTCAATCTCTCTCTTTGCAGTTTGGGCTTCAGGCTGGGAGGCAACACTAGATCAATCTTTTGG ATACAATCGTCTTGAGGTTTTGGGTGCATTTTTGTCTTTGCAGTTAATTTGGTTTATATCTGGTTTTTTGATTTATGAAGCAGTTGGTAGAATTCTCCAT CGAAATGCCAAGGTGAATGGCGTGCTCATGTTTGGAATTGCAGCATTTGGGTTTTTTATTAATTTTATCATGGTTGCATGGCTTGGTCATGATCATCACC ATCATGGCTTCGGAGTCTCAGATCATAATCATCACCATCATCATAGCCATGGAGACTCGGATAACGATCATGATCATCATCATGGTCATGGAGACGCTGT TAACGACCATGGTCATCATCATGGCCATGGAGACGCCGTTAACGACCATGGTCATCATCATGGCCACGGAGACTCAGATAACGATCATGGTCATCATCAT GGCAGCAGCCACTCAAATCATGATCATGAGAAGGGGGAACCACCTAAAATAAATGATGCGGAGAAACTTGACCTGCTTTCAAGTAATCATAGTAATAGTA ATGCCTTGAACATAAATCTGCAAGGTGCTTATTTACATGTCATGGTTGATATGATCCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTAA ACCAGAGTGGTTAGTGGTTGATCTTATGTGCACTCTTATATTTTCTGTCATATCTTTGAGTACTACTGTGCCTATGCTTAGGAATATTTATGGCATTTTG ATGGAGAGAACACCAAGTGAGATAAATATCATTGATCTGGAAAAAGGGCTCAGAAGTATCAAAGGAGTGCAAGTTATTCATGACTTGCATGTTTGGTCCA TAACAGCTGGAAAAAATGTTCTGTCTTGCCATGTAGTAGCTGAGTCTGGGATCAGTTCCATTGACTTACTTGCCAAGATTAAGGATTACTGCAAAAATAC ACATAAAATACAACATGTAACTATACAAATTGAGTAAGATTAGATTGAATCTGACTCCTGTCCGGAGAGATAATTGGTTGATTATGCTCTTGGTTTTAAG GAAAGAAACGTCGTATTATTATAGTTAAGGGGTAAAAATGACATATCACATTGGTTTTATCATTTGCTTTTGATGTACTTCATGGGGAGGATCCTTACCT GATTAGATTTCCCCTCACACTATTTTACTCCTTATTAGTTATTAGAGGTGTATCTTATGTGTTTTATTTTCCCCATTCTTGCATGAAACAAATGTATACA TGAGAACTAGCATATCAGTCTGATATGTAAGGGAGGCATTAAAAATTGAACATAGCACAATGTTGTAGAAATAAAGTTCTATTTTAAATTAATGAAATTT TTGTGGTTGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166489; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330876
| Blastp | Metal tolerance protein 1 from Oryza sativa with 45.75% of identity |
|---|---|
| Blastx | Metal tolerance protein B from Arabidopsis with 53.62% of identity |
| Eggnog | cation diffusion facilitator family transporter(COG1230) |
| Kegg | Link to kegg annotations (4337694) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413971.1) |
| Pfam | Cation efflux family (PF01545.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |