Ll_transcript_330893

• Id Trinity: TRINITY_DN49092_c2_g3_i4
• Name Transcript: Ll_transcript_330893
• Sequence: ATGTAAGCTATGTTTGTCCGTACCTAATTTGGATGAGATATTGTTTTTGTACTCCTCCGATGACATCGGTTCTGTGTACGAGGACAACATCATAAGACCC CTTTCAATTAACATCAAAGACCAATAAATGTTCTATTTCAATCACTATTACCCTTATTCATTTTCTCAATTCTAATCCCATCATTCTATTTTTGTTTCAA TCTTCTCTCCCTCTCTCCCTTGCTTTCTTTGTTTCTTCTGCATGAGTTGATGGAGGAAATTGAACATGATAAAGCACCAATCTTGGAAGGAAGGTCCAGC CAGGAAATTGAGATACCTGTTATCTCTGAGAGTCTTGACATTGTTCCGAAGACAATGGAATCATATTGCAATTCTGTTTGTGCCTTTTCCAGACAACAAA ACAGTGCTGCAGCATCAAAAGAGTTAGCAAAGTCATCAAAAAAGCTTTCTGGAGTCATAGTTTTATATGTTATTGTCATGCTTGTGGAAGTTGTTGGTGG TATAAAAGCCAACAGCTTAGCTGTCATCAGCGATGCAGCACACTTGCTTTCTGATATTGCCGGATTCTTTATCTCTCTCTTTGCAGTATGGGCTTCGGGG TGGGAGGCAACACCTCATCAATCTTTCGGCTACAACCGTCTTGAGGTTTTAGGCGCATTTTTGTCTTTGCAGTTAATTTGGGTGATATCTGGTTTTTTGA TTTATGAAGCAATTGGTAGAATTCTCCATCTAAATGACGAGGTGAATGGTATGCTCATGTTTGCAATTGCAGCATTTGGGTTTGTTCTTAACTTTATCAT GGTTGTGTGGCTTGGTCATGATCATTGTCATCATCATGGCTTTGGAGTCTCAGATCATAATCATAGTCATCATCATCATCATCATAGCTGTGGAGACTCG GATAGTGATCATGCTGACCATCATTCCAGTGGACGCTCAAATCATGATCATGGTGAGCATCATTGCAGTGGAGACTCAAATCATGATCATGGTGAGCATC ATTGCAGTGGACATTCAAATCATGGTCATGGGAAGGAGGGAGTACCTAAAATAAATGATGAGGAGAAATTTGGCCTGCTTTCAAGTAATGAGAGTAATGT CTTGAACATAAATCTCCAAGGGGCTTATTTGCATGTCATGGTTGATATGATCCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTAAACCA GAGTGGTTAGTGGTTGATCTTATGTGCACTCTTATATTTTCTGTCATATCTTTGAGTACTACTGTGCCTATGCTTAGGAATATTTATGGCATTTTGATGG AGAGAACACCAAGTGAGATAAATATCATTGATCTGGAAAAAGGGCTCAGAAGTATCAAAGGAGTGCAAGTTATTCATGACTTGCATGTTTGGTCCATAAC AGCTGGAAAAAATGTTCTGTCTTGCCATGTAGTAGCTGAGTCTGGGATCAGTTCCATTGACTTACTTGCCAAGATTAAGGATTACTGCAAAAATACACAT AAAATACAACATGTAACTATACAAATTGAGTAAGATTAGATTGAATCTGACTCCTGTCCGGAGAGATAATTGGTTGATTATGCTCTTGGTTTTAAGGAAA GAAACGTCGTATTATTATAGTTAAGGGGTAAAAATGACATATCACATTGGTTTTATCATTTGCTTTTGATGTACTTCATGGGGAGGATCCTTACCTGATT AGATTTCCCCTCACACTATTTTACTCCTTATTAGTTATTAGAGGTGTATCTTATGTGTTTTATTTTCCCCATTCTTGCATGAAACAAATGTATACATGAG AACTAGCATATCAGTCTGATATGTAAGGGAGGCATTAAAAATTGAACATAGCACAATGTTGTAGAAATAAAGTTCTATTTTAAATTAATGAAATTTTTGT GGTTGTT
• Tissue: pods
• Gene name: LI_gene_166489;
• Additional information: details;

Expression of Ll_transcript_330893

FPKM

• PAB: 1.5
• PNAB: 0.7
• PS1: 0
• PS2: 0.5
• PS3: 0.2
• PW1: 0.3
• PW2: 1.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330893

• Blastp: Metal tolerance protein 1 from Arabidopsis with 48.7% of identity
• Blastx: Metal tolerance protein 1 from Arabidopsis with 49.42% of identity
• Eggnog: cation diffusion facilitator family transporter(COG1230)
• Kegg: Link to kegg annotations (AT2G46800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449727.1)
• Pfam: Cation efflux family (PF01545.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;