Ll_transcript_332314

• Id Trinity: TRINITY_DN49093_c2_g1_i2
• Name Transcript: Ll_transcript_332314
• Sequence: ATAAGGGCTCACGTCACAAAGCTTTTTTCCCAAACTACTTGGAAAACTCTCCCTTTGACACTACCACACGAAGGAGCCGCCACTTTCCCTTCTCTCTCAC GTTCCCAACCCTTCTATGTTTTAACACTGTTGCTCAACGATGCAGAATATGTTGCGATCGAAGCAGATCAGTGCCCTTTCTAGCAGTGCTAGGAGTTTTT TCCTTAGTGGTTCACGGTGTAATGGAGCGGATGGCAATTCATGCACTTGTGCCGAGGATGAAACATGCGTGTCAAGAAGACAGGAGAGGAAAAACGAAAT TTTAAATGTTCAGAAGCCAGCCTCCATAGTATCCAAAACTACATCTGGTGTAGAAGGAAACGTGATTTCAGGAAACATAGTAAATAGACCAGCTTCCACC AAGGGTGAGTTAGTTGTTCGATCTGTTTCTGGACAACAAGTCAGGTCTACTCCAAGCCCATCAAGTACATCAGCTTCTGTTACATATGCTTGTGTGGCTG ATAGTGTTCAGAACCATGTTGATACATCTCTTAATGCTGACCAGTTTTTCCGGGCCGGTATTGCTGCTGTCAGTTTTCTTTCTGACTTAGTTAACTATAA GCTTCCTTTATCAGATGGGATGGGAATACTAGGCAACTCTAAAAATTGTGTGGTTGATCCTGCCCGGACCCTACCCAGCATCAGATCTTCAACGGTGAAA CAAATTAGAAAGGAGGATTTTATTGCTGTTCATCCAAAACCACCCATTTCTGCTCAGCCAGGGCCATCAAACCATACTAGTAATTACCATGGTGCAAAGG GAAAAGGTGATAAACCAAATTCATCTAGAGGATATAAACATGCTGCTTCTTCAGGGTCAGAGAAGTCAGGGGTTACTCCAAACATTCCTGTAAATAATAA TGACCGTAGAGCCTTGCCACCGAGAACAAGAACTCAGTCAAACCGCTCGGTGACAAATTTTGGTTCCTACATACAAAATTCAAATCCACAGGTGTCGGGT TCATTCAAGGAAAGTTTTAATAAACACTCCAGGGATTTGAAAATGCCAGCTGGGATTGCTTTTTCAAACAGGCATTTTTCAAACACAGGGCATGCTGTCG ATGTGGTTTCAGATATACTGAGACAGTTAAGGTGGTGTCCTGCTACAGAGAAGGCTCTTTGCAACCTTAATTTTTCATTAGATCCATATCAAGCTAACCA AATCCTCAAGCAACTTCAAGACCATTCAGTTGGTTTAAGCTTTTTTTACTGGTTAAAGCGACAAGCAGGTTTCTTTCATGATGGGCATACTTACACCACC ATGGTTGGTATCCTGGGTCGTGCAAAACAGTTTGGTGCAATTAAAATATTGCTGGAGCAGATGGTCAGTGATGGATGCAAGCCCAATGTTGTAACTTATA ATCGTTTGATTCACAGCTATGGCCGTGCGAACTACCTGAAAGAAGCACTGAATGTGTTCAATCAAATGCAGGAGGTAGGATGTGAGCCTGATCGCGTGAC TTACTGCACACTCATTGATATTCATGCCAAAGCTGGATATCTTGATATTGCCATGTCTATGTATGAACGGATGCAAGAAGCTGGCCTTTCTCCCGACACA TTCACTTACAGCGTGATAATCAACTGCCTTGGAAAATCTGGTAATTTAACTGCTGCCCATAGGCTATTCTGTGAGATGGTTGATCAGGGTTGTGTTCCTA ATCTAGTCACCTATAATATCATGATTGCTTTGCAAGCTAAAGCAAGGAACTATGAGACAGCATTGAAACTATATCGCGATATGCAGAATGCAGGATTTGC ACCCGACAAAGTCACTTACAGCATAGTAATGGAGGTGCTTGGCCACTGTGGGTATCTTGAGGAAGCAGAAGCAGTTTTTGTTGAGATGAAACGGAAGAAT TGGGTGCCGGATGAACCTGTTTATGGTCTTCTAGTAGACCTGTGGGGTAAGGCTGGTAATGTTGAGAAAGCTCGGGAATGGTATCAAGCAATGCTGAGTG CAGGTTTGCGTCCAAATGTACCAACAAGCAATTCTCTTCTCAGTGCATTCCTCAGGGTGCATAGGTTGTCAGATGCATATAATCTTCTTCTAAACATGGT GTCTCTCGGCCTAACCCCGACTTTACAGACTTATACATTGCTCCTCAGTTGTTGTACAGAGGCACAATCATCATATGATATGGGTTTCTGTTGTGAGCTT ATGGCAATTACTCGCCATCCTGCACATACATTTTTATTGTCCATGCCATCAGCGGGACCTGATGGTCAAAATGTCCGTGATCATGTAAGCAAATTCTTGG ACCTGATGCATTCAGAAGATAGAGAGGGCAAAAGAGGGCTAGTAGATGCCGTGGTGGATTTTCTTCACAAAACTGGACTCAAGGAAGAAGCTGGTTCTGT TTGGGAGGTGGCGGCTCAAAGAAATGTATATCCTGATGCTGTCAAGCAGAAAAGTTCTTGTTACTGGCTTATAAATCTTCATGTTATGTCGGATGGAACG GCTGTAACAGCATTGTCTAGGACACTTGCTTGGTTCCGCAGACAAATGCTGATATCCGGGATTGGCCCCAGCCGGATCGATATCGTTACTGGATGGGGTC GTAGGAGCAGGGTAACAGGTACTTCTTTAGTGAGACAGTCTGTTCATGAATTGCTGCAAATGTTCAGTTTTCCATTTTTCACTGAAAATGGCAATTCGGG TTGTTTCGTGGGATGCGGCGAGCCTCTTAGTCAATGGTTGCACCACTCGTACGTGGAGCGAATGCATTTGCTGTAGTTGGTTACCGTAGAACCATTTTCC CTTCACCTTAGAAACAATTTTGCTGTGGGGAATGAGCTTCTATTGGGATGTTTTATACATTGTATTAATTTTATTTTGCCATGGTGTGTAGTTATCCAAA TTAAATAGGTTTAATTTCTATGTTGGGAAAATATTAAACTGAATGCTCAATAGTAGTAATCTTTGTTATGCTTGTGTCACAACACCTCACTGAGAAGTTG ATAGGTTTGTGTACAGGTACAAACTATATATGTAAGTATAAATATATGTGTCTAGCTGTATTCTTATTCAATTTGACTTTGGTTAAAATTTATTGTTGTA ACTGTTTGATTGATTATGCATACAAGTTCTGCATTGTTAAAAA
• Tissue: pods
• Gene name: LI_gene_166493;
• Additional information: details;

Expression of Ll_transcript_332314

FPKM

• PAB: 8.9
• PNAB: 12.8
• PS1: 11.5
• PS2: 5.8
• PS3: 8.2
• PW1: 7.5
• PW2: 9.3
• PW3: 7.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_332314

• Blastp: Pentatricopeptide repeat-containing protein At1g74750 from Arabidopsis with 64.73% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g74750 from Arabidopsis with 64.05% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G74750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435103.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;