Ll_transcript_329568

• Id Trinity: TRINITY_DN49096_c2_g3_i4
• Name Transcript: Ll_transcript_329568
• Sequence: CTTTTATTCATTTTAAAATTATTTAACTATTATTATAATGATACAAGAATTATTAGCAAATTCCTCAAAACAATATATTATCAACAATTAGCAAAAAGAA AAGTTATTTTATATTTGAACAAAGAAGGAATGTAAATTCTCCAAAAAAAGAAAAGAAAGAATAAAAATCACAATTAGAAGCTAAGTTGAGTTATAATCTC CATATATATATATAATATATATATATATAAGATGTTTTAATGTATATAAGTTTGGGTTAAATGGATAATAAAAGGGATGGTAGCGCCATATATGGAAGCA ATAATGAAGTTCTAAATAAAGTTAGAAGTTTCAAAGATGGGAAGATGAAGATATCAAAAGATGGAGAACTTCTCCACAATCAAAATGGAACTGCAATCTC TGGTGATGTTCGTAACAGTTGGGCTGGTGTCTCAACCATGCAAGCCCTTTTTCTTCAAGAGCATAATTCAATCTGTGATACTCTCAAGAAACATTACCCA GAATTGGAAGATGAAGAGCTTTATCGGCATGCTAGATTAGTGACTTCAGCTGTGATTGCAAAGATTCACACCATTGATTGGACTGTGGAGCTCCTTAAAA CTGATACTTTGCTTGCAGGCATGCATGGCAATTGGTATGGATTATTGGGGAAGAAATTCAAGGACACATTTGGGCATGTTGGAGGATCTATATTGGGAGG ACTTGTGGGGATGAAGAAACCACAAAATCATGGGGTTCCATATTCCCTAACTGAGGAATTTGTTAGTGTTTATAGAATGCATTCACTCCTACCTGATAAC TTGCAACTAAGAGACATATCAGCTACCCCAGGCCCCAACAAAACTCCACCATTAATCAAAGAGATTCCTATGAAGAATTTGATTGGAGTAGATGGAGAAA AGACATTGACAGAAATAGGGATTGCAAGGCAAATAGTCTCAATGGGTCACCAAGCTTGTGGGGCACTAGAGCTTTGGAATTATCCATTATGGCTTAGGGA CATTATCCCACAGAACGTGGATGGAACAGAAAGACATGATCATGTGGACTTATCTGCTCTTGAAATTTATAGGGATAGAGAGAGGAGTGTGGCAAGATAC AACGAGTTCAGAAGGGCAGTGCTATTAATACCAATATCGAAATGGGAAGATCTAACGGATGATAAGGAAGCTATTGAAGTGTTGGAAGAGGTGTACGGTG ATGATGTTGAACAGCTGGATCTGCTAGTAGGTCAAATGGCAGAGAAAAAGATTAAGGGTTTTGCTATAAGTGAGACTGCTTTTATAATATTCTTGCTCAT GGCATCCAGGAGGCTAGAGAGTGATAGATTCTTCACAAGCAATTTCAATGAAGAAACATACACAAAGAAAGGGTTGGAATGGGTTAACACTACAGAGAGT TTAAAAGATGTTATTGATCGTCACTATCCTCAAATTACATATAAATGGATGAACTCTTCTAGTGCTTTTTCTGTTTGGGACTCACCCCCTAACACTTATA ACCCAATACCTATATATCTTCGTATTCCTAATTAATCCATTTTAATTTTCACCTATTTATATGTTTCTATTTGTATCTTCATATTTATGGCTTTGCTTTT CTTTACAATGCAATTGTATAAAATACAATATTAAACTCTAGTGGGTGCAACTTGGACAAAGTCCATATACATTTATTTATTTTGATTTTAATATCATAAT GTTAACAAAGACTAAAAACAAAATAAACAACTTTATATTGAGTTTAACGTATGGTAGCTTCTTTATAATTGGTTGACCATCAACACTATCCTTCTTTTAC ATCCGATCCATCACTTCAACAATCAATTGGGTTTGATATCTCCAAAGCATTGATCGAAATATTGGAGTATCATCTGGTTGGCTACTATTTGGTCTCTTTG ATTATCTAGGAATGACATCATCTTCAAGAAAATCAAACCTTTTGTTCAGCACATCCTCGACACTGCAAAGGTCAGCTTTTGGCTTTGGATCAAGGCCAAA GATGGGAATGATG
• Tissue: pods
• Gene name: LI_gene_166527;
• Additional information: details;

Expression of Ll_transcript_329568

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.6
• PS3: 0.3
• PW1: 0.9
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_329568

• Blastp: Alpha-dioxygenase 1 from Arabidopsis with 74.05% of identity
• Blastx: Alpha-dioxygenase 1 from Arabidopsis with 74.05% of identity
• Eggnog: prostaglandin G H synthase and cyclooxygenase(ENOG410XPZ3)
• Kegg: Link to kegg annotations (AT3G01420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428264.1)
• Pfam: Animal haem peroxidase (PF03098.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;