| Id Trinity | TRINITY_DN49098_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_330071 |
| Sequence | ATTTGAGGTGTTTTTTTAGTACAACACAGTTTCAGTAGAAACCAAATCAATGGCAGCACTGAAACTTGGCATGAAACTACGATCCGCAAGCCTTCTCTCT CGCTCTTCTCATCTTCTCTCCATTCACTTTCAGATGCACCACTCCATTCGAAAGATAAGCATAGATGCAAGGAGTGCTGCTTCCCAGCTTAATAGTTCTG GCCTTTTGAGGACTCAGGGCCTTATTGGAGGGAAATGGAGCGATGCTTATGATGGGAAAACAATAAAGGTTTACAATCCAGCAACGGGTGAATCCATAGC AGATGTTGCATGCATGGGTGAAAGAGAGACGAAAGACGCAATTTCTTCAGCCCATGGTGCATTTAGATCATGGAGCAAAATCACTGCTGCTGAGAGGAGC AAATATCTGAGGAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGCTAGCACAGCTTATGACCTTGGAGCAAGGGAAACCTCTTAAAGAATCTTTGG GCGAGGTAAACTATGGGGCTGCCTTTATCGAGTTTGCGTCTGAGGAGGCAAAGCGTATATATGGTGATATAATTCCTTCACCTCTATCGGATCGGCGGTT ATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATCACACCATGGAACTTTCCCCTGGCTATGATTACTCGAAAGGTTGGTCCAGCCCTAGCATGT GGCTGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTCACTGCTTTAGCTGCTGCAGAACTCTCTGTTCAAGCCGGAATTCCTGCGGGTGTTGTGA ATGTGGTTATGGGAAATGCTCCTGAAATTGGGGACGCTTTAGTTGCAAGTCCGCAGGTACGCAAGATCACGTTCACCGGCTCAACAGCTGTTGGAAAGAA ATTGATGGCAGGTTCGGCCGAGACAGTAAAAAAAGTATCCCTGGAACTTGGTGGCAATGCACCTTGCATAGTTTTCGACGATGCTGACCTGGATGTTGCA GTAAAAGGAACGATTGCAGCGAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCTAATAGAATTCTGGTTCAAGAAGGTTAGATTAAAATGATAGTTA GCTATCATATTTACAATATTATGCATTTATTTGATTTACCATCTCTTAAATCTTCATTTGATCATAGCATGTTTATTAGTTCCCAACTTATGAATATTTG TACTTTTACGTGATTAAATACTTCGATGTTTTCTGATCTTTTTGCTTTATGTTCCTTTTCCTAACTGGCGAAAGTCCTGGGTTCGTGTCACACACTAGCT GGTTCATGTAAAATGCCTGGCATAACTGATATAATCAAGACATTATAAACTTTGTTGGATTTTCGTATTGCATTTTGTAACCCTGTATACCCTAATCGTA AGGCTCATTGGTTGTGATTGCATCTGCGGTTACTCACTCACTTAGTTTGGATCTCATAACCGTGACATGAAATTTAGTGTTGTTTTTGCTGAAAAATAAA ATAAAATTAAAAAACGAAACTAGGAGAACATAACGAAAGGAGATAAAGAATAAAGATAGATTGCATTACATTCTAAAATGAGATTTTGCTCCAATTAATA GTGTTAGTGTTGTTTCTTACTCACAAATGTGTAAATCTGCACATAGATACATTACTTTTTCACAAAACAATGTTTTTAGCCAAACTCTATGTGAAGGTAT ATATGACAAATTTGCAAAGGCGTTGATTGATGCTGTCCAGAATCTGAAAGTCGGGGATGGTTTTGGTGAAGGAGTTGCTCAGGGACCTCTGATCAATGAA GCTGCTGTCAAAAAGGTCTGTGTCTCTCTTAGTATGTCAATTTCCGATATGCGTTGTTACAAGGTGTCCCGTCTAACTCATGTGAACTTCCGTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_166543; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330071
| Blastp | Succinate-semialdehyde dehydrogenase, mitochondrial from Oryza sativa with 80.39% of identity |
|---|---|
| Blastx | Succinate-semialdehyde dehydrogenase, mitochondrial from Oryza sativa with 77.37% of identity |
| Eggnog | Dehydrogenase(COG1012) |
| Kegg | Link to kegg annotations (9267109) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425767.1) |
| Pfam | Aldehyde dehydrogenase family (PF00171.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |