Id Trinity | TRINITY_DN49098_c0_g1_i7 |
---|---|
Name Transcript | Ll_transcript_330068 |
Sequence | ATGAAGCTGCTGTCAAAAAGGTCGAGACCTTACTTCATGATGCTACATCAAAGGTTTGTCATCTTTGCTATTCCTCTACTCCGATTCTCGACTTCATCCC CCCAGATTTATATGGGAACATTTTACGTAATGATTCTAAGAAAATGGACAGATGGTTTTGTTTCTGCCAACAATGAACTGTATTTTCCATCTGAGACCCC AGATTTTATCTGCATACGGCATTTTTGGGTTACTTTGGCATTTTTTGTTCTACTATGGTCATGGTGTATGTTTCAGGGGTGGAGCTAGAAGATTTTTGAC CCAAGAATAATAATACTTCATTTAAGTGGGAAACATTAAAGAATCTATATTTTTTCAATAGTTACATGTGAAAAACTTGATTTTGAAGAACTTCAGGAGT AGTGATGTTATTGCACTGAAGCCGACCCTGGATATGAAGCATGAACATTTCAAAGTAGTTGTGTCCTTGTCGGATACATTTGTATTAGATGCTTCATGGA CACTTTCAGATACTCCCATATGTACTTTTATACTTCCTTAGTTACATTTGATCAAATAACTTCATTGTGCTATATCAAAAATCAAATTTTCAGAAAAAAC CCATGTACTTTAAGGCCTTTCTTAATGGTTTCTTCGAAAGTTATCATGTTGTTTTTAATTTTTATAGTTCTTACTCTCCCTTTGATGTATTTTTTAGCAG AAAAAGATAAATCTAAATTCATTTTGTTGTACTTATGATTACATTTCCCTTTAGTGTTCTCTCTGGAAAATATAACGGTTGTAAGTCAATTGACCAAGGA TGATAATTCTGATGATCGAGTTCCATTCTAATCTGCAGGGGGCTAAAATAGTTCTCGGGGGTAAAAGACATAGCCTTGGATTAACCTTTTACGAACCAAC AGTCGTCCGTGATGTCAGTAATGAGATGCTCATATCAAGAGAGGAAGTGTTTGGACCTGTCGCGCCCCTTTTGAAGTTCAAAACCGAAGAGGATGCTATT GGAATTGCTAACAACACTAATGCAGGTTTGGGTTCGTACGTATTTACTAACAGTATCCAACGCTCATGGCGTGTTGCCGAGGCTCTTGAATATGGACTTG TGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCGTTTGGCGGCGTCAAACAGTCTGGCCTCGGAAGAGAAGGCTCCAAATATGGGATGGATGA TTATTTGGAGATAAAGTATGTTTGCATGGGAAACATGAACCAAAATTGAAGTATGAAGTATATATACAAGAGCCAGTGCCAAAGATAATGCTGCTGTTAA TGGATTAGCAGAAAATGCATTACCACTATTTTCTTTGTTTCAATTTTCTTTCATTATGTTTTTCATTGTGCTATTTTTGAGGTATTTTACAATGTTAAAT GCACTATAAGTTACCATAATTAAATATAGAAATAAATAGATCTCATTGAACTCTAATTTCTATTTTTTTTATTTTTTTATTTCAATAGACATACATTAGT TAATTTCATTATGTTTCTATGAAGCGAATAATGTATCTCCTCGTATCAGACGATAACTTGTTTCCTCCAGCCAGTAAAAGTATGGCATGTGTATTATTTT GTTTAGTTTTAGAAATTTT BLAST |
Tissue | pods |
Gene name | LI_gene_166543; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330068
Blastp | Succinate-semialdehyde dehydrogenase, mitochondrial from Arabidopsis with 80.29% of identity |
---|---|
Blastx | Succinate-semialdehyde dehydrogenase, mitochondrial from Arabidopsis with 80.29% of identity |
Eggnog | Dehydrogenase(COG1012) |
Kegg | Link to kegg annotations (AT1G79440) |
CantataDB | Link to cantataDB annotations (CNT0001754) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425767.1) |
Pfam | Aldehyde dehydrogenase family (PF00171.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |