Ll_transcript_330070

• Id Trinity: TRINITY_DN49098_c0_g1_i9
• Name Transcript: Ll_transcript_330070
• Sequence: ATTTGAGGTGTTTTTTTAGTACAACACAGTTTCAGTAGAAACCAAATCAATGGCAGCACTGAAACTTGGCATGAAACTACGATCCGCAAGCCTTCTCTCT CGCTCTTCTCATCTTCTCTCCATTCACTTTCAGATGCACCACTCCATTCGAAAGATAAGCATAGATGCAAGGAGTGCTGCTTCCCAGCTTAATAGTTCTG GCCTTTTGAGGACTCAGGGCCTTATTGGAGGGAAATGGAGCGATGCTTATGATGGGAAAACAATAAAGGTTTACAATCCAGCAACGGGTGAATCCATAGC AGATGTTGCATGCATGGGTGAAAGAGAGACGAAAGACGCAATTTCTTCAGCCCATGGTGCATTTAGATCATGGAGCAAAATCACTGCTGCTGAGAGGAGC AAATATCTGAGGAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGCTAGCACAGCTTATGACCTTGGAGCAAGGGAAACCTCTTAAAGAATCTTTGG GCGAGGTAAACTATGGGGCTGCCTTTATCGAGTTTGCGTCTGAGGAGGCAAAGCGTATATATGGTGATATAATTCCTTCACCTCTATCGGATCGGCGGTT ATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATCACACCATGGAACTTTCCCCTGGCTATGATTACTCGAAAGGTTGGTCCAGCCCTAGCATGT GGCTGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTCACTGCTTTAGCTGCTGCAGAACTCTCTGTTCAAGCCGGAATTCCTGCGGGTGTTGTGA ATGTGGTTATGGGAAATGCTCCTGAAATTGGGGACGCTTTAGTTGCAAGTCCGCAGGTACGCAAGATCACGTTCACCGGCTCAACAGCTGTTGGAAAGAA ATTGATGGCAGGTTCGGCCGAGACAGTAAAAAAAGTATCCCTGGAACTTGGTGGCAATGCACCTTGCATAGTTTTCGACGATGCTGACCTGGATGTTGCA GTAAAAGGAACGATTGCAGCGAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCTAATAGAATTCTGGTTCAAGAAGGTTAGATTAAAATGATAGTTA GCTATCATATTTACAATATTATGCATTTATTTGATTTACCATCTCTTAAATCTTCATTTGATCATAGCATGTTTATTAGTTCCCAACTTATGAATATTTG TACTTTTACGTGATTAAATACTTCGATGTTTTCTGATCTTTTTGCTTTATGTTCCTTTTCCTAACTGGCGAAAGTCCTGGGTTCGTGTCACACACTAGCT GGTTCATGTAAAATGCCTGGCATAACTGATATAATCAAGACATTATAAACTTTGTTGGATTTTCGTATTGCATTTTGTAACCCTGTATACCCTAATCGTA AGGCTCATTGGTTGTGATTGCATCTGCGGTTACTCACTCACTTAGTTTGGATCTCATAACCGTGACATGAAATTTAGTGTTGTTTTTGCTGAAAAATAAA ATAAAATTAAAAAACGAAACTAGGAGAACATAACGAAAGGAGATAAAGAATAAAGATAGATTGCATTACATTCTAAAATGAGATTTTGCTCCAATTAATA GTGTTAGTGTTGTTTCTTACTCACAAATGTGTAAATCTGCACATAGATACATTACTTTTTCACAAAACAATGTTTTTAGCCAAACTCTATGTGAAGGTAT ATATGACAAATTTGCAAAGGCGTTGATTGATGCTGTCCAGAATCTGAAAGTCGGGGATGGTTTTGGTGAAGGAGTTGCTCAGGGACCTCTGATCAATGAA GCTGCTGTCAAAAAGGTCGAGACCTTACTTCATGATGCTACATCAAAGGGGGCTAAAATAGTTCTCGGGGGTAAAAGACATAGCCTTGGATTAACCTTTT ACGAACCAACAGTCGTCCGTGATGTCAGTAATGAGATGCTCATATCAAGAGAGGAAGTGTTTGGACCTGTCGCGCCCCTTTTGAAGTTCAAAACCGAAGA GGATGCTATTGGAATTGCTAACAACACTAATGCAGGTTTGGGTTCGTACGTATTTACTAACAGTATCCAACGCTCATGGCGTGTTGCCGAGGCTCTTGAA TATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCGTTTGGCGGCGTCAAACAGTCTGGCCTCGGAAGAGAAGGCTCCAAATATG GGATGGATGATTATTTGGAGATAAAGTATGTTTGCATGGGAAACATGAACCAAAATTGAAGTATGAAGTATATATACAAGAGCCAGTGCCAAAGATAATG CTGCTGTTAATGGATTAGCAGAAAATGCATTACCACTATTTTCTTTGTTTCAATTTTCTTTCATTATGTTTTTCATTGTGCTATTTTTGAGGTATTTTAC AATGTTAAATGCACTATAAGTTACCATAATTAAATATAGAAATAAATAGATCTCATTGAACTCTAATTTCTATTTTTTTTATTTTTTTATTTCAATAGAC ATACATTAGTTAATTTCATTATGTTTCTATGAAGCGAATAATGTATCTCCTCGTATCAGACGATAACTTGTTTCCTCCAGCCAGTAAAAGTATGGCATGT GTATTATTTTGTTTAGTTTTAGAAATTTT
• Tissue: pods
• Gene name: LI_gene_166543;
• Additional information: details;

Expression of Ll_transcript_330070

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.4
• PS3: 0.5
• PW1: 0
• PW2: 0.5
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_330070

• Blastp: Succinate-semialdehyde dehydrogenase, mitochondrial from Oryza sativa with 80.39% of identity
• Blastx: Succinate-semialdehyde dehydrogenase, mitochondrial from Oryza sativa with 77.37% of identity
• Eggnog: Dehydrogenase(COG1012)
• Kegg: Link to kegg annotations (9267109)
• CantataDB: Link to cantataDB annotations (CNT0001754)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425767.1)
• Pfam: Aldehyde dehydrogenase family (PF00171.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;