Ll_transcript_292664

• Id Trinity: TRINITY_DN49103_c2_g2_i10
• Name Transcript: Ll_transcript_292664
• Sequence: ATTTATCATCCGCTCATTTTCTCTCTCTTCCGCTGCGTTTCTCTCCGATTTTAAAACCCTAATTTTCAGTCTCTGCACTTTCTCCTTGAACCTCCTCACG AATCAACACACCTTTCTCCCTCTGTCACTGATGGCAACAGAAGAAAAAGAGAACCCATATGAAGGGTTAGGAACCGGTGGCAAATTCCGAAAACGCCCAT TCCGCAGAACCCAAACGACGCCGTACGATCGACCCTCAAATTCTCTCAGAAACCCTACAATAAACAACAACAACAACAAAAAAGGTTGGTTTTCAAAGGT TGTCGATCCTGCTCATAGACTCATCAGTTATAGTGCTCATTCTCTTTTCTCCTCTCTCTTTCGCAAGCGCCTTCCACCCCCTCAATCCAACGCTTCTTCT TCGGGTGTGGAAATAGAACAGGATGTGAGGGTCAGTCATCAGGAAGAAACCGTGTTTGTTTCGAACAATTTTTCTGGCAAGCAACAAGGAGCTGTTGGTA ATGGTGAAAGTGGTGCTCAAATTAATTCCTCTGATGGAGGCACACTAACTGAACTTGAGAAGTTACTAGGACAAAAAACTTTTACCAGATCTGAGATTGA TCACTTGACAGCACTTATGCGTTCAAGAACTGTGGATGCGCCTATGCGGGAAGAAGAGAAGCGCACAGAAGTGGTTCCTTCTGAAGCAATACTGTCTTCT GAGCGAAAGGATGAAGGTCCCAAAACACCTATAGTACAAAATAGGGTTGAAAACCATCTTGCTCTAACCCCTTATGTTACTTCGAGAGTTCCTAGTGAGG ATATCGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGGAGCAGGCCTTCCAAGGTATTCTCATCAATGTTAAGTGGTCAAAGTCCTGCAGCAAGGGA GGGTCCAGCTTTTCTAAACAGTGATGATAACCTTCCTCTCAAATCCCCTATTATGTCAATTGTGCCAAGGACTGTTAGGCATGCTGGGGTTCATGAAAAT GGTTTTGCAAACCCAAGAAATCGTGGCAGATCTGCAATATATAGTATGGCCCGAACACCTTATGCCAGAATTTATCCAACCTCTACCCTCAAGGGGGTTG GACATGCTGAAGGTGAGCCATCATCTTCAACTCACTCTACATTGGATCATGACATGCTTTATGGATCTAAACAAGGGTCAGTAAAGCGTAGAAGTTCAGC ATTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATATTCCATAGGCTCAAACTTACCTCTCTCTCGCAGTTCT CTATCAATTGCTAGGAGCGGACTCGGTGTTGATGCTGCCCAGCAACCCTCATCTTCCATGCAGAATCCTATTGTGCTGGATGAAGATAAGCATAGCCATA TGAAATTGTCAGAAGAAAATGTGGGCAACACTAGGCCTAATATGAGTGGCCCTTTACCCTCGAAATCTAGTGAGATGGCTTCAAAGATACTGCAGCAACT TGATAAGTTGGTTTCCCCTAAAGAAAAGTCATCTGAATCAAGGCTGCCAACTGTGAATGATAATTCATCAATGAAGTTGGCACCTTCCATGTTACATGGA CAGGCTCTTCAAAGCATGGAAATAGTAGACTCATCAAAATTGCTGGATACTGTAAAAGATGATAGATTCAATGTTTCACCTGGAAATTTGTCTGATAGTT CTCAAAAGTTAACTTCACAGATAAACAAGGTTGAAAATGGTTCATTGAAGCTTCTTGCTCCTTCTGGTGAATTATTTCCAGTTCTAACTGATGCAGATTC TACAATACCAAGGAATCAAATCATCTCTAGTGTGAAGTCTGTGGATTCTTTTGTGATAAAACCTGTTTCATACCCTCCACAAAAGAAGAGAGCATTTCAT ATGAGTGCACATGAGGATTGCTTGGACGTGGATGATGATGCTTATCCTAATGGGGCTGTGTCCTATGTTTTTCCTGTTGAGAATAAAATGACAAGGCCCG CTGCAATGACAGTGAAGGATACCTCTGGCACTGAAGCCGTTGTGCAGGAGAATACCCAATCATTATCTGTAGTAAGGCCATCCAAAAGTTCTACAATTGG CCGGGAGGCTCATGTTGGGGCTGATGATATAACTGATGGGTGTAGGGTAGGTGCAAAAGTTGATGTATCAACCTCTACGACATCATCTACTCCTGATCAA ACCTCCAAGCCTGCTACAGCAGATACACAAACAAGTTTTGGCTCGCGCAATCCTGCTCCACCGAATGGGTTAATTGCCATTCCTCCAGTCTTTGGCTTTG TGAATAAAGTGGCTCCACGAAAGGAGTTAACTAATTCTGGTTCAATATTTGGTTTGGAAAAGGTTGTTTCATCAAAGGAGTTTGGTGCTGATGTCCCGTT AGTGAACTTTGGTAGCAACGGAAATGCTGACAAGGTTCCACAAATGCCATCTACTTCATCATCAGTTGGTGGTGAATCTACTTTTCCGAATTTCAGTGTT TCTTCCAACTCTAAGCTGGGAACCTCAATCAGGTTACTCTATACTAGCCAATTTACTGGAATGATATAATTTTTCTTCAATTACAATATTTCTGTGTTTT TTTCTGCCAGGAACATCTTTCTTTTTATTATTAACTTCTACCATTCCATGTGTTTTGCTATATGTTTTTTACATGGTTTATACCTGCTGTCTTTTGAGCC ATATATTCATGAAAATTTGTCATCTGTTTTATTGATATCTTGAACTTTGGGTTATGTTATTTATTTTTGAATTTATGGTTAAAACATGCATTTTTTCATC TTACCTTCTGCAATCTGGTTGTCTGATTTATGCAATGTTTGCAGTTTTGTATAATTGCATTAGAAAATTGAAATTGGACAAAGATATTAGGCACCTTAAA TTATGTGCAGTTAAATGTCACAGTGATTCATGTGCTAAATGTTCCCTTCATCTGCAGTTCTGCCGCTGTTGCTGCTGCAACGGATTCTATGCCAAAAGTT CTTGAGTCTAGTAATGATGATACTAAGACTAATACAGGTTCTGTTAGGTCTCCAGAACTTCCTGTTTCATCGGCAGCAACGACACCATTGTTCACATCAA CAGGTGCATTTACTTTTGGTCAGAGTAATGGATCTCTTGCTACAAGCACTTCACTTTCCTCTCCCTTTACCAGTCAGAATGTATTCAGTAGCTCATCCCT TGCAGCAAGTAGCAGCAGCATTAGTGCCACTAGTACTACTGCCATAATTCCATCAAGTAATAGCAGTTCCTCCAATCCGTTGGTGGCATCTTCATCTTCG CCAACTCCCTCTTTCAAATTTGGATCTTCTTCTTTCCCATCAACAGATTTACCTGTATCATCTTCTGGCTCAGAACCACTGGAAACCAAGAACATAAACA GTAATCTAAGCAGCACTGCTTTTGGTAGCTCATCTGCTGCTGTTGGAAGCACAGGGAGTGGCCTTTTTGGTTTCAGCTCCTCGGCAATGACAACTATAAC TAGCCAAGCTCAGGGTTCTGTTATTGGTTCTAGCAATGGATCTTTGCTTAATGCCCAGGCATCTTCTGCCAGCAGTGGGTTTGCAACTTCTACCCAAACC CAGTCAGTTCCATTTGGTTCATCTGCACCATCTCCATCATTTGGGTTGACTGGGAATACAGCCCTTTCTTCAGGCAACTCCTTGTTTCCTTCTGCAACTC CCGCCACTAATGCAGCTTTTTCTTTTGGGAGTTCATCATTTCCTTCTTCAAGTTCTGCCGTAAACATTTTCAATTCTGGTACAACTTCTGGGCTAGCTAC CTCTGCTCCCTCTTCAGCGGCCAACTCTGTAAGCTCCAACAGTGGTACGAGTTCTGCTTTGTTTGGGTCTTCAAGTTGGCAGCCCAGCAAATCGTCTCCA TTCGGGTCCACATTTAATTCTTCATCGTCTCCATCTGCTTTTGGACTTGGTACCTCTGCTTCCTCTTCAGCAGCGGCCAACTCTGTAAGCTCTAGCAGTG GTACAAGTTCTGCTTTGTTTGGGTCTGCTAGTTGGCAGCCCAACCAATCTTCTCCATTCGGGTCCGCATTTAATTCTTCACCTTCTCCATCTGGCTTTTC ATTTGGAACATCTGCTTCTGTTCCTTCTAGTTCACCCACTATGTTTTCGTCAACTCCTCAATTCTCATTCACTTCAGCAGCAGCCACTACCTCCACACAG CCTGCTTTTGGAAATCCTAATTCTGTCTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTATGGAGGATAGTATGGCTGAAGACACAGTTC AAGCAACTCCACCAGCGATTCCGGCATTTGGTCAGCAACCCAACCCGTTCGGAGCATCAACTCCATCAGGAGCCAATCCTTTCCAGTTTGGTAGTCAACA GAATGCTACTCCGCCAAACCCTTCTCCGTTTCAGGCTTCTGGCAGCGTAGACTTTAGTGGCGGAGGAGGTAGTTTCTCATTAGGCACAGGTGGTGGTGAC AAATCTGGTCGAAGAATTGTGAAAGTTAAAAACAGGCAGCGTAAGAGGTAGGACTATTGTTTATGGAAATGATTACTTTCTACGACCATTGCAGGCTGCA CTTAGCGTGACAAAAAAGTAATCTCCATAGAGTGATTGCTGGATATTGCTTTTTTACTTGGCAATCTGGACAAGCGGTGCTATTGAAAGCTAATCAAAAC ATGCAAGCTTGTGAGTTTCTTTCTTCCTCCATATATTACAGAATGCAATGCTGAAGTGTTCCAAATTTTGTAGTTGCATGGTATGAGGGAACATAATGTA CTGTACTTGTAATGGTTTCAGGTCACAGTATTCATGATTTGGTTAGTTAAAATTGCTAAAATCTCTGTATTCTTGTTACTTGTATCATACCAAAATTATG AATTTATGGTGTAGCTGGTTGTAACTTGAAGTTCCAGTGAGCAATCTGTGAGCTATTATTAGCTGCTTCTGGTTAGTCATAATTGATTTTTACTTTGCTA A
• Tissue: pods
• Gene name: LI_gene_166593;
• Additional information: details;

Expression of Ll_transcript_292664

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292664

• Blastp: Nuclear pore complex protein NUP1 from Arabidopsis with 41.42% of identity
• Blastx: Nuclear pore complex protein NUP1 from Arabidopsis with 41% of identity
• Eggnog: nuclear pore complex protein(ENOG410XPV4)
• Kegg: Link to kegg annotations (AT3G10650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427905.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;