| Id Trinity | TRINITY_DN49103_c2_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_292666 |
| Sequence | TTCGGGTGTGGAAATAGAACAGGATGTGAGGGTCAGTCATCAGGAAGAAACCGTGTTTTTGTTGTATGAGAAACAGGTTTCGAACAATTTTTCTGGCAAG CAACAAGGAGCTGTTGGTAATGGTGAAAGTGGTGCTCAAATTAATTCCTCTGATGGAGGCACACTAACTGAACTTGAGAAGTTACTAGGACAAAAAACTT TTACCAGATCTGAGATTGATCACTTGACAGCACTTATGCGTTCAAGAACTGTGGATGCGCCTATGCGGGAAGAAGAGAAGCGCACAGAAGTGGTTCCTTC TGAAGCAATACTGTCTTCTGAGCGAAAGGATGAAGGTCCCAAAACACCTATAGTACAAAATAGGGTTGAAAACCATCTTGCTCTAACCCCTTATGTTACT TCGAGAGTTCCTAGTGAGGATATCGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGGAGCAGGCCTTCCAAGGTATTCTCATCAATGTTAAGTGGTC AAAGTCCTGCAGCAAGGGAGGGTCCAGCTTTTCTAAACAGTGATGATAACCTTCCTCTCAAATCCCCTATTATGTCAATTGTGCCAAGGACTGTTAGGCA TGCTGGGGTTCATGAAAATGGTTTTGCAAACCCAAGAAATCGTGGCAGATCTGCAATATATAGTATGGCCCGAACACCTTATGCCAGAATTTATCCAACC TCTACCCTCAAGGGGGTTGGACATGCTGAAGGTGAGCCATCATCTTCAACTCACTCTACATTGGATCATGACATGCTTTATGGATCTAAACAAGGGTCAG TAAAGCGTAGAAGTTCAGCATTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATATTCCATAGGCTCAAACTT ACCTCTCTCTCGCAGTTCTCTATCAATTGCTAGGAGCGGACTCGGTGTTGATGCTGCCCAGCAACCCTCATCTTCCATGCAGAATCCTATTGTGCTGGAT GAAGATAAGCATAGCCATATGAAATTGTCAGAAGAAAATGTGGGCAACACTAGGCCTAATATGAGTGGCCCTTTACCCTCGAAATCTAGTGAGATGGCTT CAAAGATACTGCAGCAACTTGATAAGTTGGTTTCCCCTAAAGAAAAGTCATCTGAATCAAGGCTGCCAACTGTGAATGATAATTCATCAATGAAGTTGGC ACCTTCCATGTTACATGGACAGGCTCTTCAAAGCATGGAAATAGTAGACTCATCAAAATTGCTGGATACTGTAAAAGATGATAGATTCAATGTTTCACCT GGAAATTTGTCTGATAGTTCTCAAAAGTTAACTTCACAGATAAACAAGGTTGAAAATGGTTCATTGAAGCTTCTTGCTCCTTCTGGTGAATTATTTCCAG TTCTAACTGATGCAGATTCTACAATACCAAGGAATCAAATCATCTCTAGTGTGAAGTCTGTGGATTCTTTTGTGATAAAACCTGTTTCATACCCTCCACA AAAGAAGAGAGCATTTCATATGAGTGCACATGAGGATTGCTTGGACGTGGATGATGATGCTTATCCTAATGGGGCTGTGTCCTATGTTTTTCCTGTTGAG AATAAAATGACAAGGCCCGCTGCAATGACAGTGAAGGATACCTCTGGCACTGAAGCCGTTGTGCAGGAGAATACCCAATCATTATCTGTAGTAAGGCCAT CCAAAAGTTCTACAATTGGCCGGGAGGCTCATGTTGGGGCTGATGATATAACTGATGGGTGTAGGGTAGGTGCAAAAGTTGATGTATCAACCTCTACGAC ATCATCTACTCCTGATCAAACCTCCAAGCCTGCTACAGCAGATACACAAACAAGTTTTGGCTCGCGCAATCCTGCTCCACCGAATGGGTTAATTGCCATT CCTCCAGTCTTTGGCTTTGTGAATAAAGTGGCTCCACGAAAGGAGTTAACTAATTCTGGTTCAATATTTGGTTTGGAAAAGGTTGTTTCATCAAAGGAGT TTGGTGCTGATGTCCCGTTAGTGAACTTTGGTAGCAACGGAAATGCTGACAAGGTTCCACAAATGCCATCTACTTCATCATCAGTTGGTGGTGAATCTAC TTTTCCGAATTTCAGTGTTTCTTCCAACTCTAAGCTGGGAACCTCAATCAGTTCTGCCGCTGTTGCTGCTGCAACGGATTCTATGCCAAAAGTTCTTGAG TCTAGTAATGATGATACTAAGACTAATACAGGTTCTGTTAGGTCTCCAGAACTTCCTGTTTCATCGGCAGCAACGACACCATTGTTCACATCAACAGGTG CATTTACTTTTGGTCAGAGTAATGGATCTCTTGCTACAAGCACTTCACTTTCCTCTCCCTTTACCAGTCAGAATGTATTCAGTAGCTCATCCCTTGCAGC AAGTAGCAGCAGCATTAGTGCCACTAGTACTACTGCCATAATTCCATCAAGTAATAGCAGTTCCTCCAATCCGTTGGTGGCATCTTCATCTTCGCCAACT CCCTCTTTCAAATTTGGATCTTCTTCTTTCCCATCAACAGATTTACCTGTATCATCTTCTGGCTCAGAACCACTGGAAACCAAGAACATAAACAGTAATC TAAGCAGCACTGCTTTTGGTAGCTCATCTGCTGCTGTTGGAAGCACAGGGAGTGGCCTTTTTGGTTTCAGCTCCTCGGCAATGACAACTATAACTAGCCA AGCTCAGGGTTCTGTTATTGGTTCTAGCAATGGATCTTTGCTTAATGCCCAGGCATCTTCTGCCAGCAGTGGGTTTGCAACTTCTACCCAAACCCAGTCA GTTCCATTTGGTTCATCTGCACCATCTCCATCATTTGGGTTGACTGGGAATACAGCCCTTTCTTCAGGCAACTCCTTGTTTCCTTCTGCAACTCCCGCCA CTAATGCAGCTTTTTCTTTTGGGAGTTCATCATTTCCTTCTTCAAGTTCTGCCGTAAACATTTTCAATTCTGGTACAACTTCTGGGCTAGCTACCTCTGC TCCCTCTTCAGCGGCCAACTCTGTAAGCTCCAACAGTGGTACGAGTTCTGCTTTGTTTGGGTCTTCAAGTTGGCAGCCCAGCAAATCGTCTCCATTCGGG TCCACATTTAATTCTTCATCGTCTCCATCTGCTTTTGGACTTGGTACCTCTGCTTCCTCTTCAGCAGCGGCCAACTCTGTAAGCTCTAGCAGTGGTACAA GTTCTGCTTTGTTTGGGTCTGCTAGTTGGCAGCCCAACCAATCTTCTCCATTCGGGTCCGCATTTAATTCTTCACCTTCTCCATCTGGCTTTTCATTTGG AACATCTGCTTCTGTTCCTTCTAGTTCACCCACTATGTTTTCGTCAACTCCTCAATTCTCATTCACTTCAGCAGCAGCCACTACCTCCACACAGCCTGCT TTTGGAAATCCTAATTCTGTCTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTATGGAGGATAGTATGGCTGAAGACACAGTTCAAGCAA CTCCACCAGCGATTCCGGCATTTGGTCAGCAACCCAACCCGTTCGGAGCATCAACTCCATCAGGAGCCAATCCTTTCCAGTTTGGTAGTCAACAGAATGC TACTCCGCCAAACCCTTCTCCGTTTCAGGCTTCTGGCAGCGTAGACTTTAGTGGCGGAGGAGGTAGTTTCTCATTAGGCACAGGTGGTGGTGACAAATCT GGTCGAAGAATTGTGAAAGTTAAAAACAGGCAGCGTAAGAGGTAGGACTATTGTTTATGGAAATGATTACTTTCTACGACCATTGCAGGCTGCACTTAGC GTGACAAAAAAGTAATCTCCATAGAGTGATTGCTGGATATTGCTTTTTTACTTGGCAATCTGGACAAGCGGTGCTATTGAAAGCTAATCAAAACATGCAA GCTTGTGAGTTTCTTTCTTCCTCCATATATTACAGAATGCAATGCTGAAGTGTTCCAAATTTTGTAGTTGCATGGTATGAGGGAACATAATGTACTGTAC TTGTAATGGTTTCAGGTCACAGTATTCATGATTTGGTTAGTTAAAATTGCTAAAATCTCTGTATTCTTGTTACTTGTATCATACCAAAATTATGAATTTA TGGTGTAGCTGGTTGTAACTTGAAGTTCCAGTGAGCAATCTGTGAGCTATTATTAGCTGCTTCTGGTTAGTCATAATTGATTTTTACTTTGCTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166593; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292666
| Blastp | Nuclear pore complex protein NUP1 from Arabidopsis with 39.89% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP1 from Arabidopsis with 41.48% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPV4) |
| Kegg | Link to kegg annotations (AT3G10650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427907.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |