Ll_transcript_292668

• Id Trinity: TRINITY_DN49103_c2_g2_i13
• Name Transcript: Ll_transcript_292668
• Sequence: GTTCTCTTTTGGTGAGTGACATTTTTATTATTGTCGTTTTGTTTTTTCATTTGTTGTATGAGAAACAGGTTTCGAACAATTTTTCTGGCAAGCAACAAGG AGCTGTTGGTAATGGTGAAAGTGGTGCTCAAATTAATTCCTCTGATGGAGGCACACTAACTGAACTTGAGAAGTTACTAGGACAAAAAACTTTTACCAGA TCTGAGATTGATCACTTGACAGCACTTATGCGTTCAAGAACTGTGGATGCGCCTATGCGGGAAGAAGAGAAGCGCACAGAAGTGGTTCCTTCTGAAGCAA TACTGTCTTCTGAGCGAAAGGATGAAGGTCCCAAAACACCTATAGTACAAAATAGGGTTGAAAACCATCTTGCTCTAACCCCTTATGTTACTTCGAGAGT TCCTAGTGAGGATATCGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGGAGCAGGCCTTCCAAGGTATTCTCATCAATGTTAAGTGGTCAAAGTCCT GCAGCAAGGGAGGGTCCAGCTTTTCTAAACAGTGATGATAACCTTCCTCTCAAATCCCCTATTATGTCAATTGTGCCAAGGACTGTTAGGCATGCTGGGG TTCATGAAAATGGTTTTGCAAACCCAAGAAATCGTGGCAGATCTGCAATATATAGTATGGCCCGAACACCTTATGCCAGAATTTATCCAACCTCTACCCT CAAGGGGGTTGGACATGCTGAAGGTGAGCCATCATCTTCAACTCACTCTACATTGGATCATGACATGCTTTATGGATCTAAACAAGGGTCAGTAAAGCGT AGAAGTTCAGCATTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATATTCCATAGGCTCAAACTTACCTCTCT CTCGCAGTTCTCTATCAATTGCTAGGAGCGGACTCGGTGTTGATGCTGCCCAGCAACCCTCATCTTCCATGCAGAATCCTATTGTGCTGGATGAAGATAA GCATAGCCATATGAAATTGTCAGAAGAAAATGTGGGCAACACTAGGCCTAATATGAGTGGCCCTTTACCCTCGAAATCTAGTGAGATGGCTTCAAAGATA CTGCAGCAACTTGATAAGTTGGTTTCCCCTAAAGAAAAGTCATCTGAATCAAGGCTGCCAACTGTGAATGATAATTCATCAATGAAGTTGGCACCTTCCA TGTTACATGGACAGGCTCTTCAAAGCATGGAAATAGTAGACTCATCAAAATTGCTGGATACTGTAAAAGATGATAGATTCAATGTTTCACCTGGAAATTT GTCTGATAGTTCTCAAAAGTTAACTTCACAGATAAACAAGGTTGAAAATGGTTCATTGAAGCTTCTTGCTCCTTCTGGTGAATTATTTCCAGTTCTAACT GATGCAGATTCTACAATACCAAGGAATCAAATCATCTCTAGTGTGAAGTCTGTGGATTCTTTTGTGATAAAACCTGTTTCATACCCTCCACAAAAGAAGA GAGCATTTCATATGAGTGCACATGAGGATTGCTTGGACGTGGATGATGATGCTTATCCTAATGGGGCTGTGTCCTATGTTTTTCCTGTTGAGAATAAAAT GACAAGGCCCGCTGCAATGACAGTGAAGGATACCTCTGGCACTGAAGCCGTTGTGCAGGAGAATACCCAATCATTATCTGTAGTAAGGCCATCCAAAAGT TCTACAATTGGCCGGGAGGCTCATGTTGGGGCTGATGATATAACTGATGGGTGTAGGGTAGGTGCAAAAGTTGATGTATCAACCTCTACGACATCATCTA CTCCTGATCAAACCTCCAAGCCTGCTACAGCAGATACACAAACAAGTTTTGGCTCGCGCAATCCTGCTCCACCGAATGGGTTAATTGCCATTCCTCCAGT CTTTGGCTTTGTGAATAAAGTGGCTCCACGAAAGGAGTTAACTAATTCTGGTTCAATATTTGGTTTGGAAAAGGTTGTTTCATCAAAGGAGTTTGGTGCT GATGTCCCGTTAGTGAACTTTGGTAGCAACGGAAATGCTGACAAGGTTCCACAAATGCCATCTACTTCATCATCAGTTGGTGGTGAATCTACTTTTCCGA ATTTCAGTGTTTCTTCCAACTCTAAGCTGGGAACCTCAATCAGTTCTGCCGCTGTTGCTGCTGCAACGGATTCTATGCCAAAAGTTCTTGAGTCTAGTAA TGATGATACTAAGACTAATACAGGTTCTGTTAGGTCTCCAGAACTTCCTGTTTCATCGGCAGCAACGACACCATTGTTCACATCAACAGGTGCATTTACT TTTGGTCAGAGTAATGGATCTCTTGCTACAAGCACTTCACTTTCCTCTCCCTTTACCAGTCAGAATGTATTCAGTAGCTCATCCCTTGCAGCAAGTAGCA GCAGCATTAGTGCCACTAGTACTACTGCCATAATTCCATCAAGTAATAGCAGTTCCTCCAATCCGTTGGTGGCATCTTCATCTTCGCCAACTCCCTCTTT CAAATTTGGATCTTCTTCTTTCCCATCAACAGATTTACCTGTATCATCTTCTGGCTCAGAACCACTGGAAACCAAGAACATAAACAGTAATCTAAGCAGC ACTGCTTTTGGTAGCTCATCTGCTGCTGTTGGAAGCACAGGGAGTGGCCTTTTTGGTTTCAGCTCCTCGGCAATGACAACTATAACTAGCCAAGCTCAGG GTTCTGTTATTGGTTCTAGCAATGGATCTTTGCTTAATGCCCAGGCATCTTCTGCCAGCAGTGGGTTTGCAACTTCTACCCAAACCCAGTCAGTTCCATT TGGTTCATCTGCACCATCTCCATCATTTGGGTTGACTGGGAATACAGCCCTTTCTTCAGGCAACTCCTTGTTTCCTTCTGCAACTCCCGCCACTAATGCA GCTTTTTCTTTTGGGAGTTCATCATTTCCTTCTTCAAGTTCTGCCGTAAACATTTTCAATTCTGGTACAACTTCTGGGCTAGCTACCTCTGCTCCCTCTT CAGCGGCCAACTCTGTAAGCTCCAACAGTGGTACGAGTTCTGCTTTGTTTGGGTCTTCAAGTTGGCAGCCCAGCAAATCGTCTCCATTCGGGTCCACATT TAATTCTTCATCGTCTCCATCTGCTTTTGGACTTGGTACCTCTGCTTCCTCTTCAGCAGCGGCCAACTCTGTAAGCTCTAGCAGTGGTACAAGTTCTGCT TTGTTTGGGTCTGCTAGTTGGCAGCCCAACCAATCTTCTCCATTCGGGTCCGCATTTAATTCTTCACCTTCTCCATCTGGCTTTTCATTTGGAACATCTG CTTCTGTTCCTTCTAGTTCACCCACTATGTTTTCGTCAACTCCTCAATTCTCATTCACTTCAGCAGCAGCCACTACCTCCACACAGCCTGCTTTTGGAAA TCCTAATTCTGTCTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTATGGAGGATAGTATGGCTGAAGACACAGTTCAAGCAACTCCACCA GCGATTCCGGCATTTGGTCAGCAACCCAACCCGTTCGGAGCATCAACTCCATCAGGAGCCAATCCTTTCCAGTTTGGTAGTCAACAGAATGCTACTCCGC CAAACCCTTCTCCGTTTCAGGCTTCTGGCAGCGTAGACTTTAGTGGCGGAGGAGGTAGTTTCTCATTAGGCACAGGTGGTGGTGACAAATCTGGTCGAAG AATTGTGAAAGTTAAAAACAGGCAGCGTAAGAGGTAGGACTATTGTTTATGGAAATGATTACTTTCTACGACCATTGCAGGCTGCACTTAGCGTGACAAA AAAGTAATCTCCATAGAGTGATTGCTGGATATTGCTTTTTTACTTGGCAATCTGGACAAGCGGTGCTATTGAAAGCTAATCAAAACATGCAAGCTTGTGA GTTTCTTTCTTCCTCCATATATTACAGAATGCAATGCTGAAGTGTTCCAAATTTTGTAGTTGCATGGTATGAGGGAACATAATGTACTGTACTTGTAATG GTTTCAGGTCACAGTATTCATGATTTGGTTAGTTAAAATTGCTAAAATCTCTGTATTCTTGTTACTTGTATCATACCAAAATTATGAATTTATGGTGTAG CTGGTTGTAACTTGAAGTTCCAGTGAGCAATCTGTGAGCTATTATTAGCTGCTTCTGGTTAGTCATAATTGATTTTTACTTTGCTAA
• Tissue: pods
• Gene name: LI_gene_166593;
• Additional information: details;

Expression of Ll_transcript_292668

FPKM

• PAB: 7.1
• PNAB: 8.5
• PS1: 8.4
• PS2: 0.2
• PS3: 8.3
• PW1: 6.6
• PW2: 6.4
• PW3: 6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292668

• Blastp: Nuclear pore complex protein NUP1 from Arabidopsis with 39.89% of identity
• Blastx: Nuclear pore complex protein NUP1 from Arabidopsis with 41.48% of identity
• Eggnog: nuclear pore complex protein(ENOG410XPV4)
• Kegg: Link to kegg annotations (AT3G10650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427905.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;