Ll_transcript_292667

Id TrinityTRINITY_DN49103_c2_g3_i4
Name TranscriptLl_transcript_292667
SequenceGAAAAAGGTGGGAGAATTTTTAATTTTGAATTAATCTTTTCTTGGATTATCGATTTTGCTTATTTATAAAGTTGAAAGTTGAAGCTAACCTCCATTCTCA CCCGCCGCCGGTAACAACAACAACAACAACAACATAGACCTAGTAGAACACAACAACCTTCACACTTGGATCATGAGGTTGACATGGATGACCTTTTATC TTCAATAAGCGAAACCCAAAATGAACAACAACTCTTCGCTCTTCTCTCTCGTTACAGTGGAAGACAACTCTCTATTCGATTCATGGTTTCACTCCTCTCT CGTCAATCTGATTGGCAGCGTTCCCTCGCCATTCTTGATTGGATCAATCACAAGGCTCGTTACTCTCCTTCTCTCTTCGCTTTCAACGTTGTTATCAGGA ATGTCCTCAGAGCCAACCAATGGCAACTCGCACACGGCCTGTTTGATGAAATGCGCCAAATGGGTCTTTCCCCTGATAGGTACACTTACTCCACCCTCAT CACTTACTTTGGCAAACACGGCTTGTTTGATTCTTCTCTCTTTTGGCTCCAGCAGATGGAGCAAGACAATGTGCCCGGTGACCTTGTCTTGTATTCTAAT TTGATCGAGCTTTCGCGAAAGTTGTGTGACTATTCTAAGGCCATTTCCATCTTCACGAGATTGAAAAGCTCTGGTATTACTCCTGACCTTGTAGCATATA ACTCCATGATTAATGTATTTGGGAAAGCTAAGCTCTTCCGCGAGGCACGCCTTCTACTTCACGAGATGAGGGAAAACGGTGTTCAACCAGACACGGTCAG CTACTCCACGCTTCTCACCATGTACGTTGAGAATCATAAGTTTGTGGAAGCGCTTTCTGTGTTCTCTGAAATGAATGAAGGGAAGTGCGCACCTGATCTT ACCACTTGTAATATCATGATTGATGTTTACGGCCAGCTTGACATGGCCAAGGAAGCCGACCGACTGTTCTGGAGCATGAGGAAAATCGGGATTGAACCAA GCGTGGTTAGTTATAATACGCTCTTGAGGGTTTATGGAGAGGCTGAGCTATTTGGAGAAGCCATCCAACTGTTTCGTTTGATGCAAAAAAAGTGTATACA ACAGAATGTGGTCACCTACAACACTATGATTAAGATTTATGGCAAGTCCCTTGAGCATGAAAAGGCAACAAATCTTATTCAAGAAATGCAGAATAGAGGT ATTGAACCGAATTCCATTACATATTCAACAATAATATCGATATGGGAGAAGGCAGGGAAACTAGATAGGGCAGCCATGTTGTTTCAAAAGTTAAGGAGTT CAGGAGCTGAAATCGATCAGGTTCTTTACCAGACGATGATTGTAGCATATGAAAGGGCAGGTTTAGTTGGCCATGCTAAGCGTCTACTTCAAGAGCTAAA GCAACCGGATAGCATTCCTAGGGAGACTGCCATCACGATTCTTGCTAGAGCCGGCAGAATTGAAGAGGCTACATGGATTTTCCGACAGGCTTTTGATGCC GGAGAGATTAAAGATATATCTGTGTTTAGCTGCATGATTGATCTTTTCTCGAAGAACAAAAAGTATGCAAATGTTGTGGAAGTGTTTGAGAAGATGAGAG AGGTGGGATATTTTCCGGATTCTAATGTTATTGCTCTCGTGTTGAATGCTTTCGGAAAGCTGCGGGAATTTGAGAAAGCAGATGCTTTATACGGACAGAT GTATGAAGAAGGGTGTGTTTTTCCAGATGAAGTTCATTTCCAGATGCTAAGTCTTTATGGTGCAAAAAAGGATTTCAAGATGGTAGAGTCATTGTTTGAG AAGTTAGATTCCAATCCCAATATTAACAAGAAGGAGTTGCATCTTGTTGTTGCCAGCATATATGAAAGGGTAGATAGACTTAATGATTCTTCCCGGATCA TGAACAGGATGAATCAAAGAGGGAATGGAAATCATGACCGCGCTTAGAAGTATGCATCTGATTTTCCTTTGTTGACTTTGTATTGTTGATTAACATTCTT TGCACATGATCATCCACAAATGCTACATTAAGAAAACTTCTGATATTCCTAACTTGGTGTCCTATCTCCTATGTATATATAATATATTGGGCAACAACAC ATTTCTGCCTAGCATCATCATTGGCTTAAATCCAGCGTTTATGAGCACTATTCTTTATAGTCATGTCCTTCTGAGAAGTAAAAAATGAACCCCCTGATGC TTTTTCGTTTCAGAAAGTTGAGACACTCTCATTATATTGGTTGTGTCTGTTTTAACACAAATTTTCACTTTATTGCTCATTATTGTTTCTACGGCAAAAG TCCATTGATCAATGATCATAAAGTAGGGAAGAAAACAATATCATTACTCTTTTCTCTTGTAAAATCAATATTGATGTCAGATTAGTGTCTTAGTTCAAAG TTGCTATTTTATTTAGAGAAAAAATATGTGTGCACAATGTTGAATGATGCACTGATTGTGTATAAATCTTTATACTGTTAGTGTAAA BLAST
Tissuepods
Gene nameLI_gene_166594; 
Additional informationdetails; 

Expression of Ll_transcript_292667

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_292667
BlastpPentatricopeptide repeat-containing protein At5g39980, chloroplastic from Arabidopsis with 79.48% of identity
BlastxPentatricopeptide repeat-containing protein At5g39980, chloroplastic from Arabidopsis with 79.52% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G39980)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438264.1)
PfamPPR repeat family (PF13041.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;