| Id Trinity | TRINITY_DN49104_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_291967 |
| Sequence | CCTATATAATATTTAAACTATGGAATTCCCTTCTAACGAAACCACCGAAAATATCGGTGGCGCCACCACCATCTCCGCCATCCATCAAGACATAATAGAA ACCCACATCCTCACGCGCCTTGACGGCCCCTCCCTCGCCTCCGCCGCCACCACGTGCTCCCAACTCCACGCGCTCTCATCCCACGACAACCTCTGGTCCA ACATCTGCTACTCCACGTGGCCATCCACTAACACGCCACGTGTCAAAAACGTAATCTCCACCTTTTCTCATGGTTACCGCTCTTTCTTCTCCGATTCTTT CGCAACCGTCACAACCGCTCAAAATTCAAGCTCAGATCCTGACCGTACATCAGAACTAATCTCGTCCGTTGATCTTTTCCTCCTAGAAGAACCGTTACTC TCCAAAGTAGTTGAAACCGAAACCGTGACCGGGTGGTTCCGGTGCTGGCCTTTCCGTGTTGACCTGCTGGACCCGAAGGATTCAGTTCAAACACCGATTA ACTATCCAATCGGAGATGACACGTGTCATGAGATCGGCGAGGAGTTGAGGCTGAGCTGGATAGTGATCGATCCGACACGGCGGCGTGCGGTGAATGTATC TAGCCGGAGTCCGGTTTCCGTACGGCGGCACTGGCTGACGGGAGAAATGGAGGTTCTGTTCACGACGGTGGTGGAATCGGCGGTGTGCGTTATGACGGTG ATGTGCGGCGGAGGAGGAGGGAGAATGCAAGTGAGGGAAGTGAGTATGCATATGGAGGACATGGATGGGAAACAATTGAATGGGAGGGATAGTTTGGGAA TTTTGAAAGTTGTGTTGGAGGGTAAAAGGGGAAGATTGAAAAAAGAAGGAAAGGAAGAGTATGTGGAATTTGAGAAGAAGAAAAAAGAGAGGAAAGAAAA GAAGTTGAGAAGGGAGAAGAGGTTGGATATGCTATGTTTGGTTCTTGTTACAGTGTCGTTTTTGGCTCTTTCTTCTATATTCCTCTTCTGAGTTATTCTA TATGGAAATTCAGTAATACTTACACTGTAAAAATATATATATTAAAATAGAGAGAAAAATTACAGAGACACCAAGTGGATCTGTTCTTATTTGGAATATT ATATGTGAAAAAAATAAAGTATCTCTTAGTATAAGAAGTCTTACTATAAGAAGATAAATTTATCTCCTCAGTCTAATAAAATTATGACATGTATTTTGTT TTATTATTCTCTATATAAATATTTCTAAAACTAAATAAAATATTACATGTATCATACTTTTATAGGTCAGAGAATATAAATTATTCTGAAAAAATAGATA ATGTTAAAGTTTTATATTATTTTAGACCTGTTGATTAATCTTGGGAGATGGCTCATTAAATATGTTTAATAGTCAAAGTCTTACAATTATCTATTTAATC TAAAAAACAATGAAGTCCAACTTATAATTGAAAATAATATTTTTCAATATGTCTTAAAATTTCATCATTAGTTATTCATGAAAATGAAGAATCATTTCTC CTCTTCACTATATAAAAGTAATATATAGAAAAATTGGGTGGAAGAGATGACATATGTGTAAGTAAAATAATATAGACAATAAGTGATAAAGTTGACATTT ATTATAATATGATAACAAATTATTGCTAGTGAGAGATTAGAATGACTTTGGATTTATCATGAGATTGAGTGTTACATACTTGTGAGAGACTAATTATATT TGGAGTGTGATGTCTATATATTTTTTTTTTAGAATGAACACTCATTTTCGAACCTCAATAAAATCGGTATCTACCATATTCGTTGCTATAAAAAATTAAG TATTATTTTAGTCCCCATAAATTTGGCGTTAGGTCACGTTAGTCCCTCCGTGAAGTCGGCGCCGTCAATTGTAACATAACGTCCTGCGTGGAATGTTAAG TGCTGATATGGCGTGTGATGTGGTTGTCACGTGTACTGACACATGTTTTTTATTATTCCTTGACAAAAAATGACGTCGTTTTGAAATATATTTTTTAATA TAGAAATTTAATAAAATGTAGCAGACATGAAATTGGGAATTGACCCCGAAATCTTCAAACTCTTGAACCCTAACTCCATTTGTGTAGCCTTTGTTTCGTG AAAATGAGAAATTATGGTGAAGTGAGGTCGTCATGTTAAAGTAGGGATAGTTATTGTGAAGTTAACTATGATGATAGAAGTTATCCTCCTCCAATGTGTC ATTGTAGAAGGTTTGTTGTTGTCTACACTTCACACACTTCGAATAACCCAAAAAAACAGTTCTATAGATGCCCACATTTCAAGGAAGGAAACAAATATTG TGTGAAGTTTTTTTATGTGGGTTGAAAGATTGGGAAAGAATTCAAGCCATGAAAGAAGAAAAAGGGATGGATCATAGTATAGACATGAAACAATTAGAAG CTAATGTCAAAGAAATTGACATTATCATGAAAGAACATGTGGTTTAGAAAAGTTGTAACTATAGGAGCATTGTTTAATGTCTTAGCTGTTTGTAGTATTT GGTTGATTTGTTTGTTGAAGTAGTTTTGTTCTGTGTTTAAATTGATAGTTGTGTGTAGTATTGGATTCAATGTAACTTATTCCAATGAAATGCAGTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166599; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291967
| Blastp | F-box protein At2g27310 from Arabidopsis with 44.51% of identity |
|---|---|
| Blastx | Probable F-box protein At2g36090 from Arabidopsis with 51.6% of identity |
| Eggnog | F-box protein(ENOG410YK80) |
| Kegg | Link to kegg annotations (AT2G27310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432894.1) |
| Pfam | - |
| Rfam | - |
| GO | - |