| Id Trinity | TRINITY_DN49112_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_291360 |
| Sequence | CACGACTCATGTTCTCTCTCTCCTCCGTTCTATCGCCTTCGGTTTCTCTCTCCTCTTTCGATCCCAAATCGACTAGGGTAGGGTTTGGCTTTTCCTTTTC TCTTTTAATTTTTTTACTTCTTAATTCATTATGCTCTTCTATTATTAATCGTTTCTCTTCTTCGCCCAATCCAAGATTAATATCCGTTGCGATTCCGAGC TTATTGATCGACGTCAACCTTTCGTTTCAATTATTTATTTCAAAAAATATATTTTTTACGGCAAAGAGGATAGGTTTTCGTTATGTCTTGCAATTTTGGT TTAATTTCGCGTTTCCGATTTGTTTCTGCCCAAAATTATTTGTCTATGTATCATCTGAAGAAACCTCTGTTCAAGTTAGGTGGAATATTATCTTGCATAT ATATGGACAAAAGGAAGAGGTGTAAGCTTTTTTATTTTATTTTTACATTGTACTAAGTACAAGTAATTTAAAAATACAAAGTTGTTGTGAATAGAATAAA TGTTTACAAAACGTTTTCCCCTTTTTTCTTTTTTATGATAATCTTCTTAGAGTTTATGGTGCGGAGACTCACTTGTCTGATGTTTGAATTCTTTTCTGGG TTTATGGAACTCTATGTTCATGCTAATTTAGACTTGAATGCTTTTGGGGCTTGATATTGTATTGTATTTCTCTATTTTTGTTTCTTAACATTTTATCAAA CACTTCTTGTTAATCAATAGGTAGATGATATGATGTTAAATGTTTTCACAATTCTTGTAGTTATGGACTTATGATTGGGTTTGACTTTTGATTCAGAAAA ATTTCATGTTGTCAAGAGATTTAAAAATATGAAGTCGACTGTGGTAAATGTGGACACTCAATTGAGGATTTTATTTGTATGTGTTCTTGGAAGTTTATGG TTTTACTCATCCACTGAACAATGTTTGAGCACTAGTTGAACCGAGGAAGCATATGTTCACATGAAAAATAAAGCTGTTTGAGCACTGGACTTGCTTGGAA AAAGGCTTTCTGGATTGTTATCTGTTATTTTATTTCTTTGATCCTCTGTAACCCTCTTATATTTTTAACCAGAAGTGAAGTTTTCTAGGTTAATAACTGA GAAGAAATGCAGTAGTATTCATTGATATCTTTTATCTTGTATGTGATAAATAAATTGACACGGAATTTCCTGACCTGTTTCTACTGTTGTTATGTCAACT AAGTTTTTAGGATAGTAAAGGCAACCTTTTCTCTTTACAGCTGGTGCAGACGGTGATGATAGTTATAGCAAGTCGTTCTGTCTGATCTTCTGAAAATTTT GATATCTAAAACTAATATTGCCACTTTCTTTTCTTTAAGTATACTCTGATCACACTTCTGTTTGTGCTTTTAAATTAGACTTCTTTACAAGACTAGTGTA ATTTCTATTGTTCAAGAGGTCACTTTTTTTCTTAAATTTTTTGCTTTAATCTGTTTATGTAACTTGCATCTTCATGCGTAAAGAGAAGCTTGTTGTTGTA GTAGCAATATTTAGTAGTCAAATTAGGATATTTGGTATGCTCTTAAAGTAGAGGGTACATATTTCTTGTTCAATCAGTCATGACCGGTTTTAGATATTAT TCATTTAAATATCTCTGCTGCAGGAAATTTGAAAAGCATGGACCATGACAAGACTGGATGCCAAGCTGCCCCTGAAGGTCCTATACTATGCACTAACAAC TGCGGCTTTTTTGGAAGTGCGGCTACCATGAACATGTGTTCTAAGTGCCACAAAGATATGATGCACAAAGAGGAGCAGGCCAAGCTTGCAGCATCATCCT TTGGGAATATTATGAATGGATCATCAAGCAACAGTGGAAATGAACCAGTCGTTGCTGCTAATGTGGATATCTCTGTTAATCCAATAGAGCCTAAAACTAT TTGTGCACAACCTTCACTTGCTTCAGGCTCAGAGGAGAGCGGTGAAGCAAAGCCCAAGAACGGTCCAAAACGTTGCAGCAGCTGCAATAAGCGGGTTGGT TTGACAGGATTCAATTGTCGATGTGGTAACATTTTCTGTGCTGTACATCGCTACTCAAACAAGCATGATTGCCCATTTGATTACCGCACTGCTGGACGGG AAGCCATAGCTAAGGCAAACCCGGTTGTTAAGGCTGAGAAGCTTGACAAGATCTAGATTTGGTATCCTGAGTTACTGTTATGGTCAATTTCATCATGATA TAATCCAAGTTTCCTGCATGTTTTAATGGTGTTCTTATTAAATTGCTATATGCGATAGGGGACTTGGAGTTTTATGACATCTCTGCAGTTTAAAGCATTG TAATGCGTTTATTGACTTTATTCTGCTCCCTATCTCTGCAATAGTACATGTCAGAATGGTATGTGCGATTTAAAGATGATTTCAGAACATGTGGTTAGAT TGTAAATTATTGTTATGGTTTGGTGTCTATCTATGAATTTCTCTCACCAACAATGTATTTCAATTGTTTAGGCATCATTTTTCATAAATTTACTCCTTGT TTAATTAATCAGTACCTTCTTGAACTATATGTGATGTCTCAGGTGAGTATCTAATCTTTGAAAATTGATATGGATGACCATCTCATTGTTCATGTAAGAG GTTGCCTCCATTTTTGCACTGCATTGCACTATTGGTTATTACATGTACCAAACATCTTTGATATACATACTGCTGCATTGGGTGGTAGTGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166662; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291360
| Blastp | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 from Oryza sativa with 67.24% of identity |
|---|---|
| Blastx | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 from Oryza sativa with 66.67% of identity |
| Eggnog | zinc finger(ENOG4111UWC) |
| Kegg | Link to kegg annotations (4341520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458462.1) |
| Pfam | A20-like zinc finger (PF01754.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |