Ll_transcript_292387

• Id Trinity: TRINITY_DN49113_c0_g1_i16
• Name Transcript: Ll_transcript_292387
• Sequence: AAACCAAAGCTAAATATCTAACCCATCATATGAATTCATAGTCCAAAATAAAAAAACCAAAAAAACCATTAACCATTAAGAGGTAGCTGCTACCTAGGGT TACCTCACATTATTTGCAACAAGTTATTAAAAAATGGCATCATTATCATCACTTAATAGTTTAGGACGTTCAAGAAGCCGTGGGTTGAGCTTTGAAGAAG TGTGGAATAGTGGTGCACCTGATGTATTCAGTGTGAGTCGTCACTCACAACATGATGATGAAGAAGATCTCAAATGGGCTGCTATAGAAAGATTACCAAC TTATGATCGAATGAGAAAAGGGGTGTTGAAACAAATGCAAGATGATGGAAAAATTGTGCATAATGAAATTGATATTGGTAACTTAAAGTTTCAAGACAAG AAGCTTATAATGGATAAGATCATTCACTTGGTGGAGCAGGATAATGAGAAGTTTCTAACCAAACTAAGAGATCGAATTGACAGGGTGGGGATTACACTTC CAAAAATTGAAGTCCGGTATGAAGATTTATTTGTGGAAGGAGATGTGTATATTGGGGGCAGAGCACTTCCTACATTGTTCAATGTTGCTCTCAACATTAT TGAGGATGCTGCTCGAATGCTTCATCTTATAAAATCTAAGAAGAAAGAAATTCAGATTCTTAAAAATGTCAGTGGAATCGTCAAACCATCAAGGATCACT TTACTTTTGGGTCCTCCAGCCTCAGGGAAAAGTACATTACTTCTGGCACTGGCTGGGAAACTTGAGAAGGATTTAAGGACTTCTGGGAAAGTCACATACT GTGGGCATGAGCTAAATGAATTTATTCCTCAAAAAACTTCAGCCTATATTAGTCAACAAGACTTGCACATTGGACAAATGACAGTGAAAGAGACATTCGA TTTTTCAGGAAGATGTCTTGGTGTTGGAAGTAGATATGACATGTTGGCTGAACTTACAAGAAGAGAAAAACAAGCAGGAATTAAGCCAGACCCTGAAATT GATGCTTTCATGAAGGCTATAGCAATGTCAGGCCAAGAAACTAGTGTATCTACTGATTATATTCTCAAGATACTTGGATTGGATATTGTTGCGGACATTA TGGTTGGTGATAACATGGATAGGGGTATCTCTGGTGGACAAAAGAAGCGTGTGACAACAGGGGAGATGTTGGTTGGACCAGCAAAGGCACTCTTTATGGA TGAAATATCAACAGGATTGGACAGCTCCACCACATTTCAGATATGCAAGGTCATGAGACAAATGGTTCATATTATGGATATAACCATGGTGATTTCTCTT CTGCAGCCAGCTCCAGAGACATATGATCTCTTTGATGACATTATCCTACTTTCGGAAGGTCAAACCATATACCAAGGTCCACGTGAGAATGTGCTAGAGT TTTTCGAGCACGTGGGTTTCAAATGTCCCACGAGAAAAGGAGTTGCTGATTTTTTGCAAGAAGTTACATCCAAGAAAGACCAGCAACAATACTGGAATAG AGAAAATGAACCATACAGATATGTTTCAGCTACTGAATTTGTAAATGCCTTTAATTCTTTTAAAATAGGAGAACAAATTGAGAATGAGTTAAAGGTTCCC TTCGACAAGGAACAAACCCACCCTGCTGCCTTAGTGAAAGACAAGTATGGTTTATCAAACTGGGAACTACTGCAGGCATGCTTTACAAGAGAAGTGTTGC TTATGAAGCGCGGCTCATTTGTCTACATATTCAAGACTATACAGATAACAGTCATGGCTATTGTAGCCCTGACCGTCTTCCTTAGAACTCAAAATCATCC TGGAACTTTTGAGGGTGGAAATAAATACTTAGGAGGACTATTTTTCTCTATAACAAATGTGATGTTTAATGGCATGTCAGAACAAGCCACGATTATTCAA AGGCTTCCTGTCTTTTACAAACATAGGGACTTGTTCTTTTTCCCTCCATGGGCATTTGCGCTACCTATATGGATTCTCAGGATCCCTCTCTCCCTACTGG ATTCAGGGATATGGATCATCTTTACATACTATACAATTGGATATGCTCCTTCTGCTGGCAGATTCTTCAGACATTTCTTGGTACTATTTGCCGTTCATCA GATGGCTGTCTCGCTTTTCCGGTTCATAGCTGCAATTAGTAGAACACAAGTTGTTGCCAATATAATATCTTTCTTAGTCTTTCAAATAATGTTTGTACTT GGAGGTTTTATTATCTCTAGAGATGCTATTAAGATATGGCTGATATGGGGATATTATATGTCTCCTATAATGTATGGTCAGAATGCCATAGTAATAAATG AATTTTTAGATCATAGATGGGATGGACCAAATACGGATCCGAGAATTCATGCAACTACAATTGGAAGAGCACTTCTCAAGTCTAGAGGCTTCTATACACA AGGTTATTGGTATTGGATAGGAGTTGGAGCCTTGTTTGCCTATGCAATTCTTTTCAACCTTTTGTTTGTGCTTGCATTGACTTACTTGAATCCTTTCAGT GATGCAAAATCAGTCATCATGGATGAAGATGAGGAGAAGAAGAAGAATGAAAAGCCATCCGCTAGAAAAAAGGACACTCGAGGGAAATCAGAAATTAATG GTTCTTCTGATCAAGAACCAAGAACAGGAATGAGTCTGCCATTTCAACCTCTTTCACTTACATTTAATCATGTCAACTACTATGTAGATATGCCTGCAGA AATGAAGAGTCAAGGAATCCCCGATGATCGACTTCAGCTGCTTAAAGATGTTAGTGGTGCTTTCAGACCAGGTATATTGACAGCATTAATGGGTGTTAGT GGTGCTGGGAAGACAACTCTCATGGATGTATTAGCTGGAAGAAAAACAGGAGGGTACATTGAAGGGAGTATTAACATCTCAGGCTATCCAAAGAAACAAG AAACATTTGCTCGAATTAGCGGTTACTGTGAACAGACTGACATTCATTCTCCAAATCTTACTATCTATGAATCACTATTATTCTCGGCTTGGCTTCGTCT TTCGGCAGATGCAAATATGCAAGAACGAAAGATGTTTGTTGATGAAGTTATGGAATTATTGGAGCTTAAACCAATCGGAGCTACTATAGTGGGTCTTCCA GGCACAGGTGGTTTGTCAACAGAACAAAGGAAAAGGCTTACTATTGCTGTAGAGTTGGTTGCAAACCCTTCGATCATCTTCATGGATGAACCAACATCTG GCCTTGATGCCAGAGCGGCTGCAATTGTTATGCGAACTGTGAGAAATACCGTGAACACCGGGAGAACTGTTGTCTGCACAATTCACCAGCCAAGCATAGA CATTTTTGAAAGTTTTGATGAGTTAGTGTTAATGAAAAGAGGAGGTCAAATCAGCTATGCTGGACCTATTGGTCATCATTCACAGAAGCTTATAGAGTAC TTCGAAGGTATTGCAGGGGTTGAAAAAATCACAGATGGTTATAATCCTGCTACATGGATGCTTGAAGTTAGCACTCCTTTAATTGAGTCTCAACTTGGTG TAGATTTTGCAGAGATTTATGCTAACTCGACCCAATACCAGAGGAATGAAGAACTTATCAAAGAGCTGAGTACTCCACCACCAGGTTCCGAGGACTTATT CTTCGCATCAACATATTCCCAATCATTTTTTGTACAATGGAAAGCTTGTTTCTGGAAACTATATTGGTCCTATTGGAGAAATCCTCAGTATAATTTCACC CGGTACTTATTGACAATAGTTATGGGACTAATATTTGGTGCAGTCTTTTGGCAGAAAGGCAAAAGGATAGTGGAACAACAAGATTTATTAAATATGTTAG GAGGATTGTATGTTGCTGTGGTTTTCCTTGGATACATGAATGCTTCTGCAGTGCAGCCAATTATCGATATCGAAAGAACCGTTCTCTATCGTGAAAAAGC GGCAGGGATGTATTCAGCATTCCCCTATGCAATTAGCCAGGTAGCAATTGAGGGAATTTATATCCTAATCCAAACAGGTGTTTACAGTGTTATCCTTTAC TCTATGATGGGGTTACAATGGAGGGCTGATAAATTCTTCTGGTTCTTCTACTTTATAACGACATGTTTCTTGTACTACACGATGTACGGTATGATGGCTA TTGCGTTAACTCCGGGTTACCAAATTGCTGCAATTTCTATGTCCTTCTTCATGACATTGTGGAACTTGTTTGCTGGCTTTACTATTCCAATGACACAAAT TCCTATATGGTGGAGATGGTTCTATTGGATTTGCCCTGTTCCTTGGACATTCAATGGCATTATTACTTCTCAATATGGTGACTTAGAATCAGAAATAATA ATACCAGGAGCTGAAAATATGGGATTCAAGGCTTTCCTTAAAGACAGATTTGGTTTTCACCATGACTTCCTTCCAGTGATTGCTGTAGTTCATATAGCTT GGTCTATCCTCTTCTTGTGCGGCTTCGCCTTCGGAATCAAATTCTTGAACTTCCAGAAAAGATAGGCTAGGTTCTGGGTTTGTCTATGCAGTTTTTCACT TGGTTTCATAATAGTTTAAGTTTTTCATATCAGATGTATAACAACAATGTATGAACATTTTCAGAGTTATTATATAGTAGTTTGTCCATAGCCTACATCG TTGTATTGTACCAAGTATTTAATTTTTATATTTTAAATAATCAGAATGTATTTTTGTATTTGGTTTAAA
• Tissue: pods
• Gene name: LI_gene_166665;
• Additional information: details;

Expression of Ll_transcript_292387

FPKM

• PAB: 0
• PNAB: 4.7
• PS1: 17.2
• PS2: 0.5
• PS3: 2.4
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292387

• Blastp: ABC transporter G family member 39 from Arabidopsis with 66.39% of identity
• Blastx: ABC transporter G family member 39 from Arabidopsis with 66.74% of identity
• Eggnog: (ABC) transporter(COG0842)
• Kegg: Link to kegg annotations (AT1G66950)
• CantataDB: Link to cantataDB annotations (CNT0002116)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424860.1)
• Pfam: ABC-transporter extracellular N-terminal (PF14510.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;