Ll_transcript_292393

• Id Trinity: TRINITY_DN49113_c0_g1_i22
• Name Transcript: Ll_transcript_292393
• Sequence: CTTCTTATGATCTTATGTATAATTTTGTATACAAAAATGCTAACATAATGTTAACTATGAACAGACTTCTGGGAAAGTCACATACTGTGGGCATGAGCTA AATGAATTTATTCCTCAAAAAACTTCAGCCTATATTAGTCAACAAGACTTGCACATTGGACAAATGACAGTGAAAGAGACATTCGATTTTTCAGGAAGAT GTCTTGGTGTTGGAAGTAGATATGACATGTTGGCTGAACTTACAAGAAGAGAAAAACAAGCAGGAATTAAGCCAGACCCTGAAATTGATGCTTTCATGAA GGCTATAGCAATGTCAGGCCAAGAAACTAGTGTATCTACTGATTATATTCTCAAGATACTTGGATTGGATATTGTTGCGGACATTATGGTTGGTGATAAC ATGGATAGGGGTATCTCTGGTGGACAAAAGAAGCGTGTGACAACAGGGGAGATGTTGGTTGGACCAGCAAAGGCACTCTTTATGGATGAAATATCAACAG GATTGGACAGCTCCACCACATTTCAGATATGCAAGGTCATGAGACAAATGGTTCATATTATGGATATAACCATGGTGATTTCTCTTCTGCAGCCAGCTCC AGAGACATATGATCTCTTTGATGACATTATCCTACTTTCGGAAGGTCAAACCATATACCAAGGTCCACGTGAGAATGTGCTAGAGTTTTTCGAGCACGTG GGTTTCAAATGTCCCACGAGAAAAGGAGTTGCTGATTTTTTGCAAGAAGTTACATCCAAGAAAGACCAGCAACAATACTGGAATAGAGAAAATGAACCAT ACAGATATGTTTCAGCTACTGAATTTGTAAATGCCTTTAATTCTTTTAAAATAGGAGAACAAATTGAGAATGAGTTAAAGGTTCCCTTCGACAAGGAACA AACCCACCCTGCTGCCTTAGTGAAAGACAAGTATGGTTTATCAAACTGGGAACTACTGCAGGCATGCTTTACAAGAGAAGTGTTGCTTATGAAGCGCGGC TCATTTGTCTACATATTCAAGACTATACAGATAACAGTCATGGCTATTGTAGCCCTGACCGTCTTCCTTAGAACTCAAAATCATCCTGGAACTTTTGAGG GTGGAAATAAATACTTAGGAGGACTATTTTTCTCTATAACAAATGTGATGTTTAATGGCATGTCAGAACAAGCCACGATTATTCAAAGGCTTCCTGTCTT TTACAAACATAGGGACTTGTTCTTTTTCCCTCCATGGGCATTTGCGCTACCTATATGGATTCTCAGGATCCCTCTCTCCCTACTGGATTCAGGGATATGG ATCATCTTTACATACTATACAATTGGATATGCTCCTTCTGCTGGCAGATTCTTCAGACATTTCTTGGTACTATTTGCCGTTCATCAGATGGCTGTCTCGC TTTTCCGGTTCATAGCTGCAATTAGTAGAACACAAGTTGTTGCCAATATAATATCTTTCTTAGTCTTTCAAATAATGTTTGTACTTGGAGGTTTTATTAT CTCTAGAGATGCTATTAAGATATGGCTGATATGGGGATATTATATGTCTCCTATAATGTATGGTCAGAATGCCATAGTAATAAATGAATTTTTAGATCAT AGATGGGATGGACCAAATACGGATCCGAGAATTCATGCAACTACAATTGGAAGAGCACTTCTCAAGTCTAGAGGCTTCTATACACAAGGTTATTGGTATT GGATAGGAGTTGGAGCCTTGTTTGCCTATGCAATTCTTTTCAACCTTTTGTTTGTGCTTGCATTGACTTACTTGAATCCTTTCAGTGATGCAAAATCAGT CATCATGGATGAAGATGAGGAGAAGAAGAAGAATGAAAAGCCATCCGCTAGAAAAAAGGACACTCGAGGGAAATCAGAAATTAATGGTTCTTCTGATCAA GAACCAAGAACAGGAATGAGTCTGCCATTTCAACCTCTTTCACTTACATTTAATCATGTCAACTACTATGTAGATATGCCTGCAGAAATGAAGAGTCAAG GAATCCCCGATGATCGACTTCAGCTGCTTAAAGATGTTAGTGGTGCTTTCAGACCAGGTATATTGACAGCATTAATGGGTGTTAGTGGTGCTGGGAAGAC AACTCTCATGGATGTATTAGCTGGAAGAAAAACAGGAGGGTACATTGAAGGGAGTATTAACATCTCAGGCTATCCAAAGAAACAAGAAACATTTGCTCGA ATTAGCGGTTACTGTGAACAGACTGACATTCATTCTCCAAATCTTACTATCTATGAATCACTATTATTCTCGGCTTGGCTTCGTCTTTCGGCAGATGCAA ATATGCAAGAACGAAAGATGTTTGTTGATGAAGTTATGGAATTATTGGAGCTTAAACCAATCGGAGCTACTATAGTGGGTCTTCCAGGCACAGGTGGTTT GTCAACAGAACAAAGGAAAAGGCTTACTATTGCTGTAGAGTTGGTTGCAAACCCTTCGATCATCTTCATGGATGAACCAACATCTGGCCTTGATGCCAGA GCGGCTGCAATTGTTATGCGAACTGTGAGAAATACCGTGAACACCGGGAGAACTGTTGTCTGCACAATTCACCAGCCAAGCATAGACATTTTTGAAAGTT TTGATGAGTTAGTGTTAATGAAAAGAGGAGGTCAAATCAGCTATGCTGGACCTATTGGTCATCATTCACAGAAGCTTATAGAGTACTTCGAAGGTATTGC AGGGGTTGAAAAAATCACAGATGGTTATAATCCTGCTACATGGATGCTTGAAGTTAGCACTCCTTTAATTGAGTCTCAACTTGGTGTAGATTTTGCAGAG ATTTATGCTAACTCGACCCAATACCAGAGGAATGAAGAACTTATCAAAGAGCTGAGTACTCCACCACCAGGTTCCGAGGACTTATTCTTCGCATCAACAT ATTCCCAATCATTTTTTGTACAATGGAAAGCTTGTTTCTGGAAACTATATTGGTCCTATTGGAGAAATCCTCAGTATAATTTCACCCGGTACTTATTGAC AATAGTTATGGGACTAATATTTGGTGCAGTCTTTTGGCAGAAAGGCAAAAGGATAGTGGAACAACAAGATTTATTAAATATGTTAGGAGGATTGTATGTT GCTGTGGTTTTCCTTGGATACATGAATGCTTCTGCAGTGCAGCCAATTATCGATATCGAAAGAACCGTTCTCTATCGTGAAAAAGCGGCAGGGATGTATT CAGCATTCCCCTATGCAATTAGCCAGGTAGCAATTGAGGGAATTTATATCCTAATCCAAACAGGTGTTTACAGTGTTATCCTTTACTCTATGATGGGGTT ACAATGGAGGGCTGATAAATTCTTCTGGTTCTTCTACTTTATAACGACATGTTTCTTGTACTACACGATGTACGGTATGATGGCTATTGCGTTAACTCCG GGTTACCAAATTGCTGCAATTTCTATGTCCTTCTTCATGACATTGTGGAACTTGTTTGCTGGCTTTACTATTCCAATGACACAAATTCCTATATGGTGGA GATGGTTCTATTGGATTTGCCCTGTTCCTTGGACATTCAATGGCATTATTACTTCTCAATATGGTGACTTAGAATCAGAAATAATAATACCAGGAGCTGA AAATATGGGATTCAAGGCTTTCCTTAAAGACAGATTTGGTTTTCACCATGACTTCCTTCCAGTGATTGCTGTAGTTCATATAGCTTGGTCTATCCTCTTC TTGTGCGGCTTCGCCTTCGGAATCAAATTCTTGAACTTCCAGAAAAGATAGGCTAGGTTCTGGGTTTGTCTATGCAGTTTTTCACTTGGTTTCATAATAG TTTAAGTTTTTCATATCAGATGTATAACAACAATGTATGAACATTTTCAGAGTTATTATATAGTAGTTTGTCCATAGCCTACATCGTTGTATTGTACCAA GTATTTAATTTTTATATTTTAAATAATCAGAATGTATTTTTGTATTTGGTTTAAA
• Tissue: pods
• Gene name: LI_gene_166665;
• Additional information: details;

Expression of Ll_transcript_292393

FPKM

• PAB: 0.1
• PNAB: 6.7
• PS1: 18.6
• PS2: 2.3
• PS3: 7.4
• PW1: 0.9
• PW2: 0.9
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292393

• Blastp: ABC transporter G family member 39 from Arabidopsis with 68.31% of identity
• Blastx: ABC transporter G family member 39 from Arabidopsis with 68.05% of identity
• Eggnog: (ABC) transporter(COG0842)
• Kegg: Link to kegg annotations (AT1G66950)
• CantataDB: Link to cantataDB annotations (CNT0002116)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424860.1)
• Pfam: ABC-2 type transporter (PF01061.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;