| Id Trinity | TRINITY_DN49113_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_292379 |
| Sequence | CCTCCATATATATTACTCCAAAACAAAGCCAAAATACCATTAGCCATTAGGCATTTGCAACAAGTTGTTCAACAATGGAACAACCAACAATCCTTGTCAA AAGCTTGAGCCTTGTAAGAGATTGTCACACACAAGAGGAAGATGAACAAAATCTTCAATTGGCTGCTATAGAAAGATTGAGGCACATGCATGATGATGAA GTTGATATTACCAATTTAGGGTTTCAAGACAAGAAGCTTCTAATGGAAAACATACTCAAGTTTGTGGAGAAGGACAATGAGAAGTTCCTAGGAAAACTAA GAGACCGAATTGACAGAGTGGGGATTGAAATTCCAAAAATCGAAGTCCGGTATGAAAATTTATCTGTGGAAGGAGATGTGTATATTGGGAGAAGAGCACT TCCTACATTGCTTAATGCTACTCTTAACATTTTTGAGAGTATTATGGAGATGCTTCGTCTTACATCTTCCAATAAAACAGAAATTCAGATTCTCAAAGAT ATTAGTGGAATCATCAAACCATCAAGGATGACTTTACTTTTGGGTCCACCAAGCTCAGGGAAAACAACATTACTTATGACACTTGCAGGGAAACTTGACC AGCATTTAAGGATACTTGGATTGGATATTTGTGAGGACATTTTGGTTGGTGATAACATGAGCAGAGGTATCTCTGGTGGACAAAGGAAGCGCCTCACCAC AGGTGAAATGTTGGTTGGACCAGCAAAGGCACTCTTTATGGATGAAATATCAACAGGGTTGGACAGTTCCACCACATTTCAGATATGCAAGTTCATGAGA CAAATGGTTCATATCTTGGACATAACTATGGTGATTTCTCTTCTACAACCAGCTCCAGAGACATTTGTTCTCTTTGATGACATTATACTACTTTCAGAAG GTCAAATTGTATACCAAGGTCCGCGCGAAAATGTGCTCGAGTTTTTCGAACACATGGGTTTCAAATGTCCTAAGAGAAAAGGAGTTGCTGATTTTTTGCA AGAAGTAACATCCAAGAAAGACCAACAACAATATTGGTTTAGAGAAAATGAACCATACAGATATGTTTCAGTTCCTGAATTTGTACATGCCTTTAGTTCT TTCAAAATAGGAGAGCAACTTGTGAATGAGTTAAGGGTACCTTATGACAAAGGACTAACTCACCCAACAGCCTTAGTGAAAGACAAGTATGGTTTATCGA ACACGGAACTACTTCAGGCATGTTTTTCAAGAGAATGGTTGCTTATGAAGCGTAGCACATTTGTTTACATATTCAAGGCAATGCAGACAACAGTATTGTC TATTTTAGCCTTCACCGTGTTCTTTAGAACCGAAATGCCAGCAGAAAGTTTTCAAGACGGACAAAAATTCTTCGGAGCACTATTTTTCACTGTATTGAAT ATGATGTTTAATGGCATGGTTGAACAAGCTAAAATTATCATCTCGCTTCCGATCTTTTACAAACAAAGGGACCTTATGTTTTTCCCTGCATGGGCATTTG CACTACCTATATGGATTCTCAGGATCCCTATCTCTTTATTGGATTCAGGGATATGGATCATCCTTACATACTATACAATTGGATTTGCTCCTTCTGCTAG CAGATTCTTCAAGCATTTCTTGGCATTATTTAGCACTCATCAGATGGCTCTGTCACTTTTTCAGTTCATTGGTGCAGCTAGTAGAACACTAGTTGTTGCT AATATAGTATCTTTCTTGGCCTTTCAAGTAATATTTATACTTGGAGGTTTTATAATCGCCAAAGATGATATTAAGCCATGGTTGATGTGGGGATATTATG CTTCTCCTATGATGTATGGTCAGAACGCCATAGTAATAAACGAATTTTTAGACGATAGATGGAGTAAACCGAATACAGATCCTAGAATTGATGCACCTAC AGTTGGAAAAGCACTTCTCAAGTCCAGAGGCTTCTTTACAGAAGAGTATTGGTATTGGATATGCATTGGAGTCATGCTTGGGTTTGCAGTTATTTTCAAC CTTCTCTTTATAGCTGCACTGACTTATTTGAACCCTTTGGGTGATTCAAAAGCATTCCTCTTGGATGAAGATGACAAGAAGAATACAAATTCAGCCACTG CACAAAATGTTACTAAAGGGAAAGGTATAGACACAACAATGAAAGATTTGTCAGAAATTGCTTCTTCTTCTGATCAAAAACCAAGAACAGGAATTGTTCT ACCATTTCAACCTCTTTCACTTACATTCAGTAATGTCAGTTACCATGTAGATATGCCTGCTGAAATGAAGAGTCAAGGAATCCACGAAGATCGACTTCAA CTGCTTAAAGATGTTAGTGGTGCTTTCAGACCAGGTGTATTGACAGCACTTATGGGTGTTAGTGGTGCTGGGAAGACAACACTCATGGATGTATTAGCCG GAAGAAAAACAGGTGGATACATTGAAGGAAGTATTAGAATCTCAGGCTATCCAAAGAATCAAGCAACGTTTGCTCGAGTTAGTGGTTACTGTGAACAGAA TGACATTCACTCTCCACATGTTACTGTCTACGAATCGCTATTATTCTCAGCTTGGCTCCGTCTTCCTTCAGATGTAACGACACAAACGCGAAAGATGTTT GTTGAAGAAGTTATGGAATTGTTGGAGCTTAACCCAATCAGAGATAGTTTAGTGGGTCTTCCGGTCACAAATGGTTTGTCAACAGAACAAAGGAAAAGGC TTACTATTGCCGTAGAGCTGGTTGCGAACCCTTCAATCATATTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCTGCCATTGTTATGCGAAC GGTGAGGAATACTGTGGACACGGGGAGAACAGTTGTGTGCACAATTCACCAGCCAAGCATAGACATTTTTGAAAGTTTTAATGAGTTAATATTAATGAAA ATAGGAGGTCAAATCACCTATGCTGGGCCTCTTGGTCATCATTCACATAAGCTTGTAGAATATTTTGAAGCTATTGGAGGGGTTCCGAAAATCACGGATG GTTATAATCCTGCTACATGGATGCTTGAGATTAGTTCTCCTTCAATGGAGGCTCAACTTGATGTAGATTTTGCAGTGATCTATGCTAACTCCATCCTCTA CGGGAGGAATCAAGAACTAATCAAGGAGCTTAGTACTCCAGCACAGAATTCCGAGGACTTATTCTTCTCGACGAAATACTCTCGATCATTTTATGTACAA TGGAAGGCTTGTTTCTGGAAACTACATTGGTCCTACTGGAGAAATCCTCAGTATAATTTCACCCGGCTATGCATAGCAGTAGTTGTAGGAGTACTTTTTG GTGTGATCTTTTGGAACAAAGGCGCAAACATAGAGAAAAAACAAGATATATTAAATATGTTTGGAGGATTGTATGTTGCTGTGACTTTCCTTGGATACAT GAATGCTTCAGGAGTGCAACCAGTTGTTGATACCGAAAGAACCGTCTTATATCGTGAAAAGGCGGCGGGGATGTATTCGGCACTACCCTATGCAATTAGT CAGCAACTACCTATATGGTGGAGATGGTACTATTGGATTTGTCCTATTGCTTGGACATTCAATGGCATTATTACTTCTCAATATGGTGACTTAGAATCAG AAATAATAATACCAGGAGCTGAAAATATGGGATTCAAGGCTTTCCTTAAAGACAGATTTGGTTTTCACCATGACTTCCTTCCAGTGATTGCTGTAGTTCA TATAGCTTGGTCTATCCTCTTCTTGTGCGGCTTCGCCTTCGGAATCAAATTCTTGAACTTCCAGAAAAGATAGGCTAGGTTCTGGGTTTGTCTATGCAGT TTTTCACTTGGTTTCATAATAGTTTAAGTTTTTCATATCAGATGTATAACAACAATGTATGAACATTTTCAGAGTTATTATATAGTAGTTTGTCCATAGC CTACATCGTTGTATTGTACCAAGTATTTAATTTTTATATTTTAAATAATCAGAATGTATTTTTGTATTTGGTTTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166665; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292379
| Blastp | ABC transporter G family member 34 from Arabidopsis with 70.79% of identity |
|---|---|
| Blastx | ABC transporter G family member 34 from Arabidopsis with 70.79% of identity |
| Eggnog | (ABC) transporter(COG0842) |
| Kegg | Link to kegg annotations (AT2G36380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444266.1) |
| Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |