Id Trinity | TRINITY_DN49115_c2_g1_i4 |
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Name Transcript | Ll_transcript_291066 |
Sequence | CTTCAACTTCTAGGCTTCTTCTTATTTCTCTTTGCATTTCACTCTCTATACGACGTCGTTCCATGCTCTACTTCTTCACAATTTCTCCTCTCTTCGTTCC TCTCACGGATAAAAATTAGGGTTTCTTGGATATGGAAGGTGCTGAGAAATTGAATGATGAAGGTTATGGTGGTGAAGCTGGAAACAGCAGATCAGAGGAG TTTATAAGTGATTCTTTGGAAAAGGAGGAGAATTTGGTTGAAGATGAGAAGATAGAAATTGCAAATGGTGAAGATTTGGATGTGGGAATTGAGGTGATTG AAACTGTTCTTATGTCTGAGGAAGTGAAAGGAGTGAGCTCAGTTGTGCATGCTGAGAACAAGGGTCCCAATGGAAGCCTTGGGGTTGATGGAAGATCTGT ATCAGGTGCTAAAAGAGCCCGCGTCACTACTGACGAACATCAGCCTTCAGTTCATTTCATTTATAATTCCCTCACAAGAGCTAGTAGGCAGAAGCTTGAG GAACTGCTACAGCAATGGTCAGAATGGCACGAGAAACACGTTTCTTCGTCGAGTGTAAGACCACTTGTTTTATTTTTGTTAATGTATAGCGATTTACCTT TATAGAGAATAAAATAGTATTACTACAAAACATTGAAAAAGAATAGGGATGTCAATATCGTTCATGAAAGGGATTTAAATTTGAAATGAAGTTGGAGTTT GTGCAGTTGTCATTGTTGAGCTGCAATCTAAATGTTGACTAACGATTGGCTAAGATGCACAAAAACAGCTAAATGCCTACTTATTTCATAATAAAATATA GGACAATTGAAGGTGTAAGCACATTTTTAATTTCAAACCAAGCTTGAGGCTTGTTTTTTTATGAATTGCTCAGTAATTTTGGGATTGTTGATGAGTTTGG ACTCTAATCTTCGTATAAAAAAAATCCTTATTAATATGTGGGAATCTGACTTACCTTTATTTTATTGGAACCAAGGAAGCAAAAGCTTGATGCCTAAGTC AGAAGTTGTTTTCACTGATGGTTACATGAGATAAGGTCATAAAGGCTTCTTGTTGCTTATGTTTGGCTTTAGAGTTTAGACTTAGGTTTTGATAGACAAA TTAAATGATCTAGAGTACATCCAGTGGAATGATGGTTATATGTTTGGTGTATTCACTGTATTTGCAAGGGAATGGTGGCAATTGTGCACTTGTGCTGTTA AAAAAATGTTAAGAAGTTTTTCTGTCCAGGATCCTAGTGAAGTGGTGGAATCTGGCGAGGAGACATTTTTTCCTGCTCTAAAAGTTGGCCATGAGGAGAC CTCCGCTGTGCCATTCTGGATGGATAACCAGACAATTAATGATCAGAATAAGGATTTCATTCCTTTAAATCATAATTCTGTGCCTCTATATGATCGTGGA TTTGCTTTGGGATTGACGTCGGCTGATGGTCCAAGTAATCTGGATGGGGGTCTGGAGATCATTGATGCTGCTGCTCGGTGTTTCAATTGTGGTTCATACA GTCATTCTTTGAGAGAATGTACAAGACCTCGTGACAATGTTGCTGTCAATAATGCTCGTAAGCAACTCAAGTCCCGGAGGAACCAGAATGCTTCTTCCCG CAACCCAACTCGATATTATCAGAGTTCTCCAACTGGAAAGTATGCTGGTCTGAGAGCAGGTGCTCTTGATGATGCAACCCGTCAACTCTTAGGCTTGGGG GAGCTTGATCCTCCTCCATGGCTTAAAAGAATGCGGGAGATCGGATACCCACCTGGATATCTAGATGTGGATGATGAGGATGAGCCTTCAGGCATCACAA TATACACTGATAGGGAGATTGCAGAACAAGAGGATGGGGAAATTATGGAAGTAGATAATTTGAAACCAAAACAGAAAATGGCTGTTGAATTTCCTGGAAT AAACGCTCCGATTCCAGAAAATGCTGATGAAAGATTGTGGGCTGCTGGGGCTGCACCCTCGAGTTATGACAGAAACTTACCGCAGCACAGGTCAAATCAT GGTACAGATTATGGCAGCAGAGGACATTTTCGTGATCAGAGACCGCCAGGGGATTTCAGGGATGATGCTCCTCCAGGGGATCCAGGATTTAGTTCACCCA GGTATAGTTTTCATCCGAGGTATGGTGGACATGATTCTGGCCAAAGAAGTCCTCCAATGTCGAGATTCCAATCAGAATGGAGTAGGAAAAGTCCTTCGCG TGATGAAGAATCCCCACATCCTAGTTCCTTCCATTCTCTATATTACTCATCATCATCAGAGAGGCTTCCTTCGCCCCGGGACCGGGATTCAGGTAGATAT GGAAACCGGACCTCTGGAAGCCTGCATGACAGAGACCGAGATCGTCCATCCCAAAATAGAGACATGTCAGAAGACCGGCACTATCGCAGTCGGAGGTGAG TAGGCATCAACAGGATTGTATTGGTAGGCTGTGAAGATACATTTCCATCATTCATAGGTCAAAATCATGTTTACCCTTTTACTTGTTAGGGACAATTTTA CAATGTTTTGATGAAGTTGACAGATTTATTTGTTACTAGGATTCATAACTGAAAACTTACTTTTATTTGCTTGTACAATGGATTATCAGCTGTATTACTG TTGTGTCATTTTTATACAATATTTGGACATTTGTGAAACAAGTGGAGGTTTTAATTTTTAACTTTTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_166681; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291066
Blastp | Zinc finger CCHC domain-containing protein 8 from Xenopus with 31.19% of identity |
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Blastx | Zinc finger CCHC domain-containing protein 8 from Xenopus with 31.19% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (446764) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428177.1) |
Pfam | PSP (PF04046.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |