Ll_transcript_292887

Id TrinityTRINITY_DN49117_c0_g1_i7
Name TranscriptLl_transcript_292887
SequenceTGGCATATACTCCTCCCCTGGACAGTGTTAGTAGCAATGAAAAGAGTAGAGATTGTTACAACGTTGTGTTTGTGATATGCAATAAACGATAATGCAACCT TTCTCTTTCTCCACCTCACACTTCTCTCTTCCCACTCCTCCTCCCTTCTCTTTCTCCTCCTCCAACCACCACCACCACCACCACCACCACCACTCTTTCA TTTCTTTCTCCTTAAAACCACCACTTGATTCCAACAACTTCCGCCGCCCCACCAAACCCCTCAAAACCACCACCACCACCACTGCCGCGCCTTCTCCAAA CCCTACTAACCCTAGTTCTAACTCTAACAACCCTCTCAAACAAAAAACCCCTTCCCCTAATCCCCTTACTGGCAAGCTTTGGCTTACTAGCAAACTCTCT CCTCCTCCTCCTCCTCCGGAACGGCAATTCGTAGACCAAGTCGACGCCCCGAAACCGGAGCGCGACGAAGAAGATGGAAAGCAAAACGATGTCGTTTCTG ATGATGATAATGAGAACTTGACCATTTCTCGACAGACGGGGAAAATCTTTGTGGCGAACTTACCCTTATGGGTAAAGAAGCCGGAGGTTTTCGATTTTTT TCGCCAATTTGGGCCTATTAAGAACGTGATTTTGATTAAAGGACACAATGAGACCAAGAGGAATGCGGGGTTTGGGTTTGTCATTTACGATGGTGATGAG ACCGGGGCTGAGAATTCAGCCATGAAGGCGGTCGAGTTTGATGGGGTTGAGTTTCATGGGAGGGTTTTGACTGTGAAATTGGATGATGGGAAGAGATTGA GGGATAAGGAGTTAGAGAGGGAGAGATGGGTGAAAGGGAATGGTGATAAGGGAGAGTATCGTTCTAAGTGGCATGAGGAGAGGGATGGGTCTAGGAAGGA GTTCCAAAAGGTTCTTGAGACCGAGCCCGAGAATTGGCAGGCTGTTGTAAGCGCTTTCGAGAGAATTAAGAAGCCTGCTAGAAAAGAATATGGCTTGATG GTTAAATATTATGCGAGACGAGGGGACATGCATCATGCACGTCAAGCATTTGAGAGTATGCGAGCTAGAGGAATAGAGCCATCTTCACATGTGTACAGTA GTTGGTAGAGACATGGAAGAAGCATTACATTGTGTTAAAAAGATGAAGGAAGAGGGCATTGAAATGACTATAGTGACATACAGTATAATTGTGGGAGGAT TTGCTAGAATGGGCAATGCTGATGCTGCAGATCAATGGTTTAACGAGGCCAAAGAGAGGCTTACTGATTTAAACGCAATCATTTATGGGAACATAATATA TGCACACTGTCAAGCTTGCCATATGGATCGAGCCGAAGCCTTGGTGCGGGAGATGGAAGAACAAGGGATAGATGCTCCCATTGACATATATCATACCATG ATGGATGGTTATACAATGATTGGCAAAGAAGATAAATGCTTGATTGTGTTTGACAGACTGAAGGAATGCGGTTTCTCTCCCTCGGTCATCAGCTATGGTT GTCTTATTAATCTTTACACCAAGATAGGAAAAGTTTCTAAAGCATTGGAGATTAGCAAAATAATGAAAATGGCTGGCATAAAACATAACATGAAGACTTA CTCTATGTTGATTCATGGATTCTTGAAGTTAAAAGATTGGGCTAATGCATTCTCCATTTTTGAAGATATTACTAAAGATGGTTTAAAGCCTGATGTAGTA CTCTACAACAACATTGTAAGTGCTTTTTGTGGGATGGGTAATATGGATCGTGCCATTTGTATTGTCAAGAAAATGCAGAAGGAGAGGCATAGACCTACAA CACGCACATTTTTGCCCATTATACATGGCTTTGCAAGGGCTGGGGAGATGAGGAAAGCCCTTGAGATCTTTGATATGATGAGGAGAAGTGGCTGTATTCC TACTGTGCACACATATAATGCTCTTCTTCTTGGTCTTGTTGAGAAGCGTCAGATGGAAAAGGCTGTAAGAATATTGGATGAAATGAATCTGGCTGGCATA AGCCCAAATGAACGTACATATACAAATCTTATGCATGGTTATGCTTCACTTGGCGATACTGAAAAAGCATTTCAGTACTTCACAATTATGAAGAACGTCG GCCTGGAGATTGATGTATATACTTATGAGGCATTGCTGAAGGCATGTTGCAAGTCAGGCAGAATGCAGACTGCCCTAGCAGTCACAAAAGAAATGAGTAC CCGAAAGATTCCCAGAAACACTTTCGTCTATAATATACTAATTGATGGGTGGGCTCGGAGAGGTGACGTTTGGGAGGCTGCAGACCTAATGCAACAAATG AGAAATGAAGAAGTTCAACCGGACATCCATACTTACACTTCTTTTATTAATGCTTGTAGTAAAGCTGGGGATATGCAGGTATGATATTTGTTAAGAAAAT AATTTATTATCATTTCCTTGTTAAGTTGATGACTACTTGTGGTGGACTAAAAGTAAAGGTATTATTGTGTCATTTCATTCATCCCCATCATCATTTAGCA TACGAATGAATTGTGCGGGAAAACATTGCTTGTTATGCATCTCATTTCAGTTCTTTCTGCATACTTTCATGAAAGGTCTTTGTGATTTGTGTTTGACATT TTTCATGATAATCATCCTGGGCTTGTTGTGTTAAACCTCCTCGAATCTTGGCGTTTGATTGAAAGCAACAGAGATTATAAAAGAAATGGAAGCATCTGGT ATAAAACCAAACCTCAAAACCTACACCACTCTTATACACGGTTGGGCGCGTGCTTCTTTACCAGAGAAGGCTCTAAGATGCTTTGAAGAGATGAAAGTGG CTGGATTGAAACCAGACAAAGCAGTATACCATTGTCTTATGACATCTTTGTTATCAAGAGCCACCTTTGCTCAATCATACATATATAGTGGACTATTGTC TGTATGTAGAGAGATGATAGAATCCGAGATGACTGTTGACATGGGAACTGCAGTCCACTGGTCGAGATGCTTACTCAAGATCGAGAGGACGGGAGGAGAA CTAACGGAAGCACTACAAAAGACATTTCCACCGGATTGGACATCACATCATGTTGATGTTAATTCTGGAAAAGAAACAGCTGATCCGGAAATCGTTGTTG ATGATGATGATGTATATTATGGCAATGGAATCAGTAATGATGAGGACAATGATGATGAAGATATTGATAATGATATGTAATACAGGTCATGGTTTTGAGT TGTCATTGTAAATGTAAATGGGCAGAATGCCATGGTGGCATGCAAGTTTTTTCTGCCTTAAATTCTTCACCTATTAAAGATACGAATAGACAAAAAATAG TGGTATCCTTTGACCAGACCCATGAGTTTTCAGGTGTTTGGAACATAGCTTCAAATTTCATCTTGTAATTCTCCTTGCATTTCACAGCTTTTAACCAAGA TGTGTTTGGTGAAATTGAAAATTTAGCACTAAGTTTTTATTTCATTAGAACGTTATTAATTTTAGC BLAST
Tissuepods
Gene nameLI_gene_166692; 
Additional informationdetails; 

Expression of Ll_transcript_292887

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_292887
BlastpPentatricopeptide repeat-containing protein At5g04810, chloroplastic from Arabidopsis with 75.59% of identity
BlastxPentatricopeptide repeat-containing protein At5g04810, chloroplastic from Arabidopsis with 75.59% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G04810)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019461472.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;