| Id Trinity | TRINITY_DN49117_c1_g4_i5 |
|---|---|
| Name Transcript | Ll_transcript_292904 |
| Sequence | ATTGAGTGAAAGGATGAGAGCAGAGAGATATTTTAGAAAGAAGAAAGTAAAGAAAAGAGAGAAACCAGAAAATATCTTCTGAAAATAGATTTTAAAAAAG GTAGTTGAGGTATATACACAACTATACATAAGAGAGAATAAAGATCTTGTTGACCCTCTTTCCATTTCAATTGAAAAAAGCTTATAATTTTACTTTCAAG TAATCCAATTAAATTCAACCCATTTTTGTTCTTCATTTATTCTTGCCCTGTGAACTCGTTTTTCTAACATTCTACGACTCTGATTGAAAGAGATTCTGAT CTCTAAGTGTTTGTGAATATTACTGAGTGAAAAGTCAACAACAAAAACATGGGAAATCCAGAAGTTGTAGAAGAAAGAGAGATTCTTCTGAAGAAGATTA AAGACCTTGAAGCTGTTCAGGTTGACCTGAAACAAGAGATGTCAAAGCTCAAGCTTTCATCATCATTTAAGGATCTTCATCAACAACAACACCATCATCA TCACAGGCATAGGTCTCATTCACTTTCACCACAACGTTCAAGGTTGAGAAAGGAAGCACCAACACCACTTGCATCTAACAAAGCTTCATCATCTTCTCCT TCTTCTTCTTCCCCTTTGCAGAGGGAAAGTAAAAGTGATGAGCTTCAACACCATGGTTCTGTGAACCTCACTGATAGGGAGTGTCTCAATATATTGCAGT CAATGGGTCACTCTCTTCATATATTGGATCTTCAATGCCGAATCATATACTGGAACCCCAGTGCTGAAAATCTGTATGGTTATGTAGCAGCTGAAGTTCT TGGAAGGGATGGGATTGAGCTGCTTATAGATCCCAAGGATTTTGGTTTAGCTAGTGATGTATTCAATCGTGTCACAATGGGAGAGAGCTGGACTGGCCAG TTCCTTTTGAAGAATAAGATTGGGGACAAGTTTTTAGCCGCGGCAACCAATACACCTTTCTACGACGACGGTGGAAACTTGGTTGGGATTATTTGTGTCT CCAGTGATTCAAAACCCTTTCTTGCAATGAAAGTTCCGTTTTCAGGTGTAAAGAATGCTGAACTAGATTCAGGTTCCACCTATCCTAGAAGTAGCATTAC AAGTAAACTTGGGCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCAAAAATTTCAAATGTGGCATCAAAGGTGAGTAACAAGGTTAATTCAAGA ATCTGGGCAGGAGAAGATAATCTCAATCGTGAAGGTGGGAGCGGAGAAAGTCATCATTCTGAGCACCTTTTCTCAGACTCTGCTCTTTCTGATCAGAGAG AAGATGCTAATTCCAGTGGAGCTAGCACTCCTAGAGGAGATCTGCAACCATCTCCTTTTGCTGTATTTTCTCATGTTGACGAGAAATGCCAAGGGAATTC TTTGAGAGACTCTGGCAATGAGAATGAAGGAAAACCTATTCACAAGATCATGGCTTCTAAGGCTGAAGCTTGGATTCAAAAGAGAACATTATCATGGCCA TGGAGAGCAAATGGTCGGGAAGGATCTGAACCAAGGAATGTTCATGTTGCTTGGCCTTGGCTGCCGAGTGATCGAGAAAATGAGTCAGTTAATCATAACA GCGTTTCTTATGGGTTGAAACTTGAGACCCAGGCAGTTGAAAGTAATCAACATGTTAATAATGAGGCTTCAGGATCCTGGTCCTCCTTTAACGTTAACAG CTCAAGTAGTATCAGCAGCTGTGGAAGTAGCAGCAGTTCTACTGTCAATAATAAAGTGGATGCCAACACTGATTGCTTGGATTATGAAATTTTGTGGGAC GACTTGACAATTGGAGAACAAATTGGGCAAGGTGTCATGTTCTTAACTAAAGTGTCATGCATGAGAAAATAAATTTTTGATAATCTATGCATCAACAATG GACAAGCATCTGTTTAAACAACCTTGACATGTTATCTATTTAGAGTTCTTATTTTTGAAGTCCGTGCTTATGAGGCCATGATAATTTAGAGCCCCCTCTT GCAAACCTATATAGTGGTCAATGGTTATTATGCATTGGTATGCTATACCTGCTTTCTATTTAACTGTCTGTTGTTGTATTGCAGGTTCTTGTGGAACTGT TTATCATGCTCTGTGGTATGGATCGGATGTTGCCGTCAAGATTTTCTCAAAGCAATACTCAGATGATGTGATAATGTCCTTCAGACAAGAGGTATCTGTA TTGAAAAGACTTCGTCATCCAAATATTCTCCTCTTTATGGGGGCAGTGACTTCACCTCAACATCTATGCATCGTGACAGAATTTTTCCCACGTGGTAGCT TGTTCCGTATGCTTCAGAGAAACGCAGCCAAACTTGACTGGAGAAGGCGAGTTCAAATGGCCTTAGATATAGCGAGAGGTGTGAATTATCTTCATCATTA CAACCCCCCTATCATTCATCGAGATCTGAAGTCTTCAAATATTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAG TATGAAGCATTTCTCACAACTAAGACCGGAAGGGGCACGCCCCAGTGGATGGCACCAGAAGTTCTTCGAAATGAACCCTCGGATGAGAAGTCTGACGTTT ACAGCTTTGGGGTGATATTGTGGGAACTCGCAACTAAAAAGATCCCTTGGGATACTCTAAACATAACACAGGTTACTGGAGCCGTAGGGTTTATGAACCA TAGGCTAGAAATTCCTGAAGATGTTGATCCACAGTGGGCTTGTATAATCAAGAGCTGCTGGCACAGTGATTCAGCTTGCCGGCCAACATTCGAGGAACTT TTAGAAAGGTTGAAAGAACTGCAGAAACAGTTTGCTGTTAAGTTTCAGGCAGCAGCCCGGTCGAATGGCCGGGAAAGCAATCAAAAGGAGTCCTAGACAC AGCTTTTCAGATTGTTTCCATTGTGTCACTTGCAGCAGATGATGCATAAGGATTTTTTTGCACATGAGTTCATTGATGAATGATGAGTTTGTAGAAACAG CTGGTTTTGGAGTCATGCAGCATTGCTAGTTTGAATTCTTGGTACCATATGAGGGTGGAAAAATAAATTTAAAAAATGGGAAAATGGTTAATAACCAAAC TACATTTTAGTCATTGTTTTCTTTAATGTCATCATAGAAGTTCTTTAATATATATTAGTGATACTGGATCCTTGTTGTTTTGTGAATAGGTTTCCACTAT CAGCATTTGTAATTTTATGGAAAATTAATGTTGTACTACTATTTAGTTGTACAGAAGGTAGAAAAAAAGAGAAAACACAAGAAGTTTCATTTTATTATAT ACTTCCCTGTGTATTTTCAAATCTATGAGACCACTTTTGGTAATTTCTTTCAAATCAAATTATAGTGTGTGACAACGGCATTACATGATGTGGTTCACAT TTGAAATAATACACTTATTATTCATâBLAST |
| Tissue | pods |
| Gene name | LI_gene_166696; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292904
| Blastp | - |
|---|---|
| Blastx | Serine/threonine-protein kinase EDR1 from Arabidopsis with 60.76% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002789) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425312.1) |
| Pfam | PAS fold (PF00989.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |